Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju10g2014 | ATGGCATTTCACGTTGCTTGCCCAATTACATGTCGCCGAATCTGCTTCTGCTCGCTAGGGTTTCCTCGCGCCCTCCATACATCGAAGGCTAAGCATGAGTTCTTGGACGATGTGGCAAGAATCGATGAGTTTCTCAAGGACCCTTTGGGAATTAGGGCTCCAGAAAGGGAACAGACCGTGCAAGTCGCCGTCCCTAAGGTTGTGCCGCCGCCGCCGCCACCACCTCAGCGGCAGTTGCAGTCAACGGTGGTGGCTGATGGGGTCCCTGCTGTTGATGAGGTGGACGAGGCAGTGTCAACTAAGGCCAAAAGGGTTGCGTTGCAGCGGAAGGGGGCTGCCGCGATGATTGCTGCCGAGGAGTACGCCCGTCAGATTGAGTCCGCGGATGCGGTGGATGCATCAGGAAGTCTTGCTGGGGAAGAGCATGGTAATTTGAACGTCAAAGTCTTTTGCCGAATGTGCAATCGTGTTGAAGATGAAGGAAGCGAAAGAGCTAAAAAAATGCTTTCATGCAAAAGTTGTGGTAAGAAGTACCATCGGAACTGCTTAAGAAGTTGGGCTCAACATAGAGATTTATTTCATTGGAGTTCATGGACTTGTCGTGCTTGCCGAATGTGTGAGGCCTGTAGAAGGACAGGAGATCCAAGTAAGTTCATGTTTTGTAAAAGGTGTGATGGTGCTTATCATTGTTATTGTCTACATCCTCCTCACAAGAATGTTAGTTCTGGGCCTTATTTGTGCTCAAAACATACAAGGTGCCACAGCTGTGGTTCCAATGTTCCTGGAAATGGTCTAAGTGTGAGGTGGTTTCTGGGATACACCTGCTGTGATGCATGTGGAAGATTGTTTGTCAAAGGAAACTATTGTCCTGTTTGTCTGAAGGTCTATAGAGATTCAGAATCAACACCAATGGTTTGCTGTGATATTTGCCAGCGTTGGGTGCACTGCCAGTGTGATAATATAAGTGATGAAAAATATCTTCAATTTCAAGTGGATGGGAATCTACAGTATAAATGTCCCACGTGTCGTGGGGAGTGTTATCAGGTCAAGGATCTTGAGGATGCTGTTAAAGAACTTTGGAAGAGAAGAGATATTACTGACAGAGATTTAATTGCCAGCTTGAGGGCTGCAGCTGGTTTACCAACTCAAGAAGAAATATTTTCTATTTCACCTTATTCAGATGATGAGGACAGTGAGCCTGTAAAAGCAAAGAGTGAATCTGTTCGATCTTTTAAGTTCTCTCTGAAGAATTTCTCTGATCACTCACCAAAGAAGACAAAAGATTATGCAAAGAAATGTTCAAGTAAAAAGTCTGCCAAGAAAAAGGACTATCAAACTGGTAAAACTGATCCAAGTTTGGAAGGACATAGTGATGTCAAATCTGTGCATAGCTTGGATGATGATATCCAATCCCACAGACATGAAGTTGCTGATGTTTATTCTTCACCTGCTGGTGGAAGCCTGAGTCAAACTGAAGGGAATGCTAATCAGCCAGGGATTTTGAAACAGAAGTTTGTAGATGAGGTCATGATCAGTGATGAGGAGAGAAAACCGAGAGTTGTTCGAATAAAGAGTAGTAAGGCTCAAACTCTTGATAGTGAAGAGGAGGCTGGAAAAAGTGGTGATAAGAATCAGAATGTGAGGGGAAAGAAGTTGGTTATAAATTTTGGGGCTCGGAAAATTAACATGACCAATTCTCCACGGTCTGATACTTCAAGTTGCCAAAAAGATCAAGATCTTGTTAGCACTAATGGCAATGAAGATATTAGCCAATCAGGGAAAGGAGACAAGTTTATGTTAGACAGACATGATGGCACAGCTAGAAATGCTGATGGTAAAGGAAACAAAGTTGAATCTCGCCAATCAAAAGATTTAAAGGTTTCAGAAAGAGAAAGAAATTTGATAAAGCCTGCAAAAATTAAGCCAGAAGTTTCTGAATTGAACTCAGCCTCTGTTAGGAGCAATGTTGCTGATGGGAGCGAATCTATTCCCATAGAGCGACCTCTTATCTTGTTCGGGAAGCGCCGCACTGAGAGAACGACTGGTCAAGACAGAGCTGTACAAACTATGTCACAAGGGGAGAGGATGCTTATGGGGAAGCAGTCAGAAGGCAGGTCTGATGCATATGATGAGACAGATGACAATGCTAACCATACACCATCACATTCTTTGCCAAAAGACCCCAAACCTTTATTGAGATTGAAATTTAAGAAACCTAGCATTGAAAGTCAAAATTCTCTGTATCGTGAGGATGAGAAGATTACAATCAAAGGGCAGAGGTCAAAAAGGAAGAGGCCTTCACCTTTCATGGAGAAAGTGTCGAACAATGAAGATGAAGATGTAGCACAATCGCATCAAGATGGTCCAATGGAGGAATTCATGGAGGCTAATTGGATATTGATGAAATTGGGCAAAGATGCCATTGGAAAGAGAGTTGAAGTTCATCAGGCATCTGACAATTCTTGGCACAAGGGATCGGTCACCAGTGTAATTGACGGAACTTCAAAGATATCTGTTACCTTAGAGGATGGTAAGGTGAAGACCTTGGAGCTCCGGAAGCAAGGAGTCCGTTTTATTCCTCATAAGCAAAAGAGATCAAAAGCTTGA | 2607 | 0.4354 | MAFHVACPITCRRICFCSLGFPRALHTSKAKHEFLDDVARIDEFLKDPLGIRAPEREQTVQVAVPKVVPPPPPPPQRQLQSTVVADGVPAVDEVDEAVSTKAKRVALQRKGAAAMIAAEEYARQIESADAVDASGSLAGEEHGNLNVKVFCRMCNRVEDEGSERAKKMLSCKSCGKKYHRNCLRSWAQHRDLFHWSSWTCRACRMCEACRRTGDPSKFMFCKRCDGAYHCYCLHPPHKNVSSGPYLCSKHTRCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDICQRWVHCQCDNISDEKYLQFQVDGNLQYKCPTCRGECYQVKDLEDAVKELWKRRDITDRDLIASLRAAAGLPTQEEIFSISPYSDDEDSEPVKAKSESVRSFKFSLKNFSDHSPKKTKDYAKKCSSKKSAKKKDYQTGKTDPSLEGHSDVKSVHSLDDDIQSHRHEVADVYSSPAGGSLSQTEGNANQPGILKQKFVDEVMISDEERKPRVVRIKSSKAQTLDSEEEAGKSGDKNQNVRGKKLVINFGARKINMTNSPRSDTSSCQKDQDLVSTNGNEDISQSGKGDKFMLDRHDGTARNADGKGNKVESRQSKDLKVSERERNLIKPAKIKPEVSELNSASVRSNVADGSESIPIERPLILFGKRRTERTTGQDRAVQTMSQGERMLMGKQSEGRSDAYDETDDNANHTPSHSLPKDPKPLLRLKFKKPSIESQNSLYREDEKITIKGQRSKRKRPSPFMEKVSNNEDEDVAQSHQDGPMEEFMEANWILMKLGKDAIGKRVEVHQASDNSWHKGSVTSVIDGTSKISVTLEDGKVKTLELRKQGVRFIPHKQKRSKA | 868 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju10g2014 | 868 | SUPERFAMILY | FYVE/PHD zinc finger | 195 | 256 | IPR011011 | - | |
| Alju10g2014 | 868 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 144 | 260 | IPR013083 | - | |
| Alju10g2014 | 868 | FunFam | PHD finger family protein | 145 | 260 | - | - | |
| Alju10g2014 | 868 | MobiDBLite | consensus disorder prediction | 421 | 460 | - | - | |
| Alju10g2014 | 868 | MobiDBLite | consensus disorder prediction | 594 | 639 | - | - | |
| Alju10g2014 | 868 | ProSiteProfiles | Zinc finger PHD-type profile. | 286 | 345 | IPR019787 | - | |
| Alju10g2014 | 868 | FunFam | PHD finger family protein | 283 | 345 | - | - | |
| Alju10g2014 | 868 | ProSiteProfiles | Zinc finger PHD-type profile. | 148 | 206 | IPR019787 | - | |
| Alju10g2014 | 868 | MobiDBLite | consensus disorder prediction | 744 | 786 | - | - | |
| Alju10g2014 | 868 | SUPERFAMILY | FYVE/PHD zinc finger | 142 | 206 | IPR011011 | - | |
| Alju10g2014 | 868 | MobiDBLite | consensus disorder prediction | 516 | 546 | - | - | |
| Alju10g2014 | 868 | PANTHER | HL01030P-RELATED | 98 | 657 | - | - | |
| Alju10g2014 | 868 | MobiDBLite | consensus disorder prediction | 700 | 717 | - | - | |
| Alju10g2014 | 868 | ProSitePatterns | Zinc finger PHD-type signature. | 151 | 203 | IPR019786 | - | |
| Alju10g2014 | 868 | SMART | PHD_3 | 205 | 251 | IPR001965 | - | |
| Alju10g2014 | 868 | SMART | PHD_3 | 288 | 343 | IPR001965 | - | |
| Alju10g2014 | 868 | SMART | PHD_3 | 150 | 204 | IPR001965 | - | |
| Alju10g2014 | 868 | MobiDBLite | consensus disorder prediction | 743 | 786 | - | - | |
| Alju10g2014 | 868 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 283 | 345 | IPR013083 | - | |
| Alju10g2014 | 868 | MobiDBLite | consensus disorder prediction | 559 | 591 | - | - | |
| Alju10g2014 | 868 | MobiDBLite | consensus disorder prediction | 483 | 498 | - | - | |
| Alju10g2014 | 868 | MobiDBLite | consensus disorder prediction | 516 | 731 | - | - | |
| Alju10g2014 | 868 | MobiDBLite | consensus disorder prediction | 479 | 501 | - | - | |
| Alju10g2014 | 868 | SUPERFAMILY | FYVE/PHD zinc finger | 286 | 344 | IPR011011 | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Alju10g2014 | 10 | 39301845 | 39309570 | Alju10g2014 | 10 | 39301845 | 39309570 | ECH |