Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1439 ATGGGTCAAGCTTTTCGAAAGCTCTTCGACACTTTCTTCGGGAACTCCGAGATGCGGGTTGTGATGCTTGGTCTTGATGCTGCCGGCAAAACAACTATACTGTACAAGCTGCATATTGGAGAAGTTTTATCGACTGTCCCTACTATCGGTTTCAATGTGGAGAAAGTTCAGTATAAGAATGTTATGTTCACAGTTTGGGATGTAGGAGGGCAAGAAAAATTAAGGCCACTTTGGAGGCACTATTTTAATAACACAGATGGTTTGATATATGTTGTTGATAGTTTGGACCGAGAGAGAATTGGAAAGGCAAAGCAGGAATTTCAGGCTATCATAAATGATCCTTTCATGCTCAATAGTGTCATCTTGGTTTTTGCCAACAAACAAGACATGAAAGGAGCAATGGCGCCAATGGAAGTATGTGAAGGACTAGGTCTCTTTGAACTCAAGAATAGAAAATGGCACATACAAGGAACTTGTGCATTAAGGGGAGATGGCCTTTATGAGGGCTTGGACTGGTTGGCTGCAACTCTGAAGGAGAGAAATGCTGCTGGATACTCTTCACTAGGAACCTCATCGTTCTAA 582 0.4227 MGQAFRKLFDTFFGNSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIINDPFMLNSVILVFANKQDMKGAMAPMEVCEGLGLFELKNRKWHIQGTCALRGDGLYEGLDWLAATLKERNAAGYSSLGTSSF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1439 193 NCBIfam small GTP-binding protein domain 16 136 IPR005225 GO:0005525
Alju10g1439 193 CDD Arf1_5_like 18 176 IPR045872 GO:0003924
Alju10g1439 193 SMART arf_sub_2 1 181 - -
Alju10g1439 193 SMART sar_sub_1 9 177 IPR006689 GO:0003924|GO:0005525
Alju10g1439 193 FunFam ADP-ribosylation factor 2 4 186 - -
Alju10g1439 193 Pfam ADP-ribosylation factor family 6 176 IPR006689 GO:0003924|GO:0005525
Alju10g1439 193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 181 IPR027417 -
Alju10g1439 193 Gene3D - 3 186 IPR027417 -
Alju10g1439 193 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
Alju10g1439 193 PANTHER ADP RIBOSYLATION FACTOR-RELATED 8 176 IPR024156 GO:0005525
Alju10g1439 193 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Alju10g1439 193 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Alju10g1439 193 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Alju10g1439 193 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1439 Alju-ChrAlju10 16991814 16995605 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g1439 10 16991814 16995605 Alju10g1439 10 16991814 16995605 ECH