Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1396 ATGAGTGACAATTTGATGGATAAAGTCAGCGCCTTGGGGGAGCGCCTGAAAATTGGTGGGTCTGAGATGGGTCGAAAGATGAGTGAAGGCATGAGTTCTATGAGCTTCAAGATGAGGGAATTTTTTCAGGTTCCAAGCGAGACTGATAAGGTTGTTGAGGATGCCACCTCTGAGACACTTGATGAGCCTGATTGGGCCATGAATCTTGAGCTTTGCGATTCGATCAATAATGAGCAGGTCAACAGTGTAGAAGTGATTCGTTCTATCAAGAAACGGATCATGGTTAAGAGTCCTAGGGTTCAGTACCTGGCTATGGTTTTGCTTGAAACATGCGTTAAAAATTGTGAAAGGGCCTTCACAGAAGTGGCAGCAGAGAGAGTCCTTGACGAGATGGTCAAGCTGATTGATGACCCTCAGACTGTTGTGAATATCAGGAACAAGGCCTTAGCACTCATTGAGGCATGGGGGGAGTCAACCAGTGAGCTTCGCTATTTGCCTGTATATGAAGAAACGTACAAGAGTTTGAAGTCAAGAGGTATTCGATTCCCTGGTCGTGACAATGAAAGTCTGGCACCTATTTTTACTCCTCCTCGTTCAGTGACTGCTTCAGAAGTTCATGTTGATCAGTCAGGACAAGTTCAGCATGATATTCCTGTGCAGACTTTCACACCTGAGCAAACAAAGGAGGCTTTCAATGTTGCAAGAAATAGCATTGAGCTTCTTTCTACTGTTCTGTCTTCATCACCTCAACAGGATGTTCTCCAGGATGATTTGACTGCAACCCTTGTACAACAGTGTCGTCAGTCTCAATTTACCATACAGAGCATCGTTGAGACTGCTGGAGATGATGAGGCACTTCTTTTTGAGGCCTTGAATGTTAATGATGAGATTCAGAAGGTTCTCACCAAGTATGAAGAATTGAATAAGCCTTCTGCTGTTGCTCCTCCTCCTCTTAGGCAGGAGCCTGCTATGATACCTGTCGCCATTGAGCCAGACGAGACGCCTCTTAATACTCAAGAAGATGCCTTGGTTAGAAAGCCGGCTAGTTCGAGAGTTGGCGGTCATGGAGGGAATAACAATGATGATATGATGGATGATCTTGATGAGATGATATTTGGCAAAAAAAGTGGGGATGCATCACCAATTGCGGGCCAAGATCCAAAGAAGCAACAGTCCTCTAAAGATAATGATCTCATTTCATTCTAA 1206 0.4453 MSDNLMDKVSALGERLKIGGSEMGRKMSEGMSSMSFKMREFFQVPSETDKVVEDATSETLDEPDWAMNLELCDSINNEQVNSVEVIRSIKKRIMVKSPRVQYLAMVLLETCVKNCERAFTEVAAERVLDEMVKLIDDPQTVVNIRNKALALIEAWGESTSELRYLPVYEETYKSLKSRGIRFPGRDNESLAPIFTPPRSVTASEVHVDQSGQVQHDIPVQTFTPEQTKEAFNVARNSIELLSTVLSSSPQQDVLQDDLTATLVQQCRQSQFTIQSIVETAGDDEALLFEALNVNDEIQKVLTKYEELNKPSAVAPPPLRQEPAMIPVAIEPDETPLNTQEDALVRKPASSRVGGHGGNNNDDMMDDLDEMIFGKKSGDASPIAGQDPKKQQSSKDNDLISF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1396 401 Pfam GAT domain 235 308 IPR004152 GO:0035091|GO:0043130
Alju10g1396 401 SUPERFAMILY GAT-like domain 180 309 - -
Alju10g1396 401 Pfam VHS domain 46 179 IPR002014 GO:0035091|GO:0043130
Alju10g1396 401 ProSiteProfiles VHS domain profile. 55 183 IPR002014 GO:0035091|GO:0043130
Alju10g1396 401 FunFam TOM1-like protein 2 41 200 - -
Alju10g1396 401 SUPERFAMILY ENTH/VHS domain 40 183 IPR008942 -
Alju10g1396 401 Gene3D - 42 200 IPR008942 -
Alju10g1396 401 PANTHER TOM1-LIKE PROTEIN 1 1 400 IPR044836 GO:0035091|GO:0043130|GO:0043328
Alju10g1396 401 PIRSF TOM1 32 400 IPR014645 -
Alju10g1396 401 Gene3D - 220 310 IPR038425 -
Alju10g1396 401 MobiDBLite consensus disorder prediction 385 401 - -
Alju10g1396 401 CDD GAT_GGA-like_plant 231 307 - -
Alju10g1396 401 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
Alju10g1396 401 SMART VHS_2 48 179 IPR002014 GO:0035091|GO:0043130
Alju10g1396 401 MobiDBLite consensus disorder prediction 344 401 - -
Alju10g1396 401 CDD VHS 49 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1396 Alju-ChrAlju10 16083128 16086249 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g1396 10 16083128 16086249 Alju10g1396 10 16083128 16086249 ECH