LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju10g1186	ATGTACATTATGGCCTATTCAACCCTCCGCGTTAATTTACCTTCGACATTTCCCATGATCCCTCCTCGTTCTTCATACCCAATTCTTCATTCGCTCTCCCCAAAACCCCCAATTCTTAATCTTCGTCTTCACTCTAGTCCTCTGAGAATCCCGAAGTTGATTTCTCATGTAAGCAGCGTTCAGGAAGCTGTCGGAAGTGCAATTAGTCTCATCCAATCGTCTCCTCCCACTTGGGAATCCGCCCTCGCCAGCAATCTCTTAATCTTCCTTTTGGGTTCTCCGCTTTTGGTCGCTGGGTTGTCTCTCTCTGGTATTGGCGCAGCTTTTCTTCTAGGAACACTCACTTGGCGCGCTTTTGGCCCTTCTGGGTTCCTTCTCGTTTCTGCCTATTTCATCATCGGTACAGCAGTTACAAAGGTCAAGATGGCTGAGAAAGAGGCTCAGGGTATTGCTGAGAAAAGAAAAGGACGAAGAGGTCTTGGTAGTGTTGTTGGATCCAGTGCAGCTGGTTGCCTTTGTGCTTTTCTCTCAATTTATGGATTTGGGGGTGAGACATTTTCTCAGCTTTGGTTACTTGGTTTTGTTGCCAGTTTTTGTACCAAGTTGAGTGATACTGTCTCAAGTGAGATAGGGAAGGCATATGGCAAAACAACGTACCTAGTTACAACATTTAATATAGTTCCAAGAGGAACAGAAGGGGCTGTAAGTGTGGAAGGAACTTTAGCAGGGATTTTAGCATCTATGGTTCTTGCCTTCTTCGGTTGTCTCTTGGGTAAGATCAACGCATATAAAGCGGCTATATGTGTTCTAGCTTCTCAGATTGCTAATATCGGTGAGAGCTTCGTAGGCGCTACTCTTCAAGGAAAGAAAGGATTTCAATGGCTTACCAACGATGTGGCCAATGTGATCAACATATTGACTGGCAGCATCATGGCAATCTTATTGCAGCTGGCACTCCAGAAGTTGAATATAACAAGAAAACAAAACTCAAATAAGAAGAAAAGAGGTTATGTGTGCTTTGTCTTGAAGTATACGTATAGGGGACAAGACTTGTTGAGAGAATTGAAGGGGAAGAAAATATTATTTGTTGGGGACTCACTTAGCCTCAACCAGTGGCAATCACTGATTTGCATGCTGCATGTTGCTGCTCCTAATTCAAAATACACTCTCCACAGAGTTGGAGACCTCTCCACCTTCACTTTGCCTAAGTATGAGATTTCTGTAATGCTGTCTCGTAATGCATTTTTGGTAGATATAGTGAAAGAAAAGATAGGGACTATTCTGAAGCTTGATTCCATTGAGAATGGGGATTCATGGAAAGGATACAATGTCATCATCTTCAATACCTGGCACTGGTGGCTTCATAAAGGCCACCAACAACCATGGGAGTACATTCAAGTGGGGAATAAGATAGAGAAGGATATGAATAGGTTGGATGCTTTCAGAGAAGCAATAAGAACATGGTCAAAATGGGTCGACTCTAATGTCAATCCTAACATCACCAAAGTTTTCTTTCAATCCACCTCTCCAACCCACTACAATGGGGAGGAGTGGAATGGGACCAGCTCAAGCACATGCAAAGGACAAAGCAGACCAATAGGTGGTTCAAGATATTCAACAGGTCCACCACAGGCAGAAGTAATAGTGAAGCAAGTGTTGGGTCAAATGGCCAAACCTGTTAGTTTGTTGGATATCACAACTCTTTCGCAGCTCAGGAGAGATAGCCATCCCTCTGTTTATGGCATTTATGGTGGGAGGGGAAATGATTGTAGCCATTGGTGCCTTCCTGGTGTCCCTGACACTTGGAACCAACTCTTGTTTGCTATGCTTGTCAACAAGTAG	1842	0.4376	MYIMAYSTLRVNLPSTFPMIPPRSSYPILHSLSPKPPILNLRLHSSPLRIPKLISHVSSVQEAVGSAISLIQSSPPTWESALASNLLIFLLGSPLLVAGLSLSGIGAAFLLGTLTWRAFGPSGFLLVSAYFIIGTAVTKVKMAEKEAQGIAEKRKGRRGLGSVVGSSAAGCLCAFLSIYGFGGETFSQLWLLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFNIVPRGTEGAVSVEGTLAGILASMVLAFFGCLLGKINAYKAAICVLASQIANIGESFVGATLQGKKGFQWLTNDVANVINILTGSIMAILLQLALQKLNITRKQNSNKKKRGYVCFVLKYTYRGQDLLRELKGKKILFVGDSLSLNQWQSLICMLHVAAPNSKYTLHRVGDLSTFTLPKYEISVMLSRNAFLVDIVKEKIGTILKLDSIENGDSWKGYNVIIFNTWHWWLHKGHQQPWEYIQVGNKIEKDMNRLDAFREAIRTWSKWVDSNVNPNITKVFFQSTSPTHYNGEEWNGTSSSTCKGQSRPIGGSRYSTGPPQAEVIVKQVLGQMAKPVSLLDITTLSQLRRDSHPSVYGIYGGRGNDCSHWCLPGVPDTWNQLLFAMLVNK	613

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju10g1186	613	Pfam	Integral membrane protein DUF92	90	308	IPR002794	GO:0016020
	Alju10g1186	613	PANTHER	PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED	347	606	IPR029962	GO:0016413
	Alju10g1186	613	MobiDBLite	consensus disorder prediction	516	539	-	-
	Alju10g1186	613	Pfam	GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p	347	609	IPR026057	GO:0016740
	Alju10g1186	613	MobiDBLite	consensus disorder prediction	516	537	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju10g1186	Alju-ChrAlju10	12754988	12763142	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju02g0852	02	6378982	6380564	Alju10g1186	10	12754988	12763142	CCT
	Alju10g1186	10	12754988	12763142	Alju10g1186	10	12754988	12763142	ECH