Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0883 ATGCAGCTGCACATATCACCAAGTTTGAGGCATGTGACAGTGCTGCCAGCAAAAGGGTTCAAAGATTTCATAAAAGTGAAGATTGCATCAAGGAAGGTGTCTTACAGGATGCTCTTCTATGTCCTCTTGCTCTTCACTTTCCTTCTTCGTTTTGTCTTTGTGTTGACTGCTGTTGACTCCATTGATGGAAATTTCAAGTGCTCTACCATAGGTTGCCTGGGGAAAAAAATAGGACCAAGGATTCTGGGAAGAAAGCTTGAATCAAATGTCCCAGAAGTGATATACAAAGTATTAGATGAACCAGTAGAGAAGGATGAAGTAGAAGGAAGATCTGATATTCCACAGACTTTGGAAGACTTCATGACTGATATGAAGGAAGGTGGATATGATGCCCAAACATTTGCTGCCAAACTCAGAGAAATGGTCATCCTTATGGAAAAGAGGACCAGGACAGCCAAAATCCAAGAATACCTATATCGCCATGTAGCATCAAGCAGCATACCTAAGCAGCTTCACTGCCTTGACCTGAGTCTGGCCAGTGAACACACCAACAATGCACAAGCTCGCCTTCAGCTTCCTCCTGCAGAACTAGTCCCTGCCTTGGTTGATAACTCCTACTTCCACTTTGTTCTTGCATCGGACAATGTTCTGGCAGCTTCAGTCGTTGCCACCTCACTGGTCCGAAACTCTAGGCGACCCAGCAAGGTGGTCTTGCACATCATTACAGATAGAAAAACTTATTATCCCATGCAAGCTTGGTTCTCATTGCACCCTCTATCACCTGCTATAATCGAGGTTAAGGCATTGCACCATTTTGATTGGTTTACAAAGGGAAAGGTGCCTGTTCTTGAAGCAATGGAGAAAGATCAACAAGTGAGGTCACAGTTCAGAGGGGGATCATCAGCTATCGTTGCGAATAGTATTGAGAAACCACAAGTTGTTGCAGCAAAACTGCAAGCTCTAAGTCCCAAGTATAACTCCATGATGAACCACATAAGGATACATCTTCCAGAGTTGTTCCCTAGTCTCAACAAGGTAGTCTTCCTAGATGATGACATTGTCGTACAAACTGATCTTTCACCTCTGTGGGACGTTGAGATGAATGGAAAAGTGAATGGAGCAGTAGAAACATGTACCGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAATTTCTCTCATCCCTTGATAGCCGAAAACTTCGACCCTGACGAATGTGCTTGGGCTTATGGCATGAACATTTTTGATCTTGAAGCTTGGAGGAATACAAATATAAGCCTAACATACTATCATTGGGTTGAGCAGAATATAAAATCAGATCTGAGTCTTTGGCAGCTAGGGACGTTACCCCCTGGATTGATAGCTTTCCATGGTCACGTCCACGTAATTGACCCTTTCTGGCACATGCTGGGGTTGGGATATCAAGAAAACACAAGTTTTTCTGATGCTGAGAGTGCTGGTGTGATCCATTTTAATGGCAGGGCAAAGCCATGGCTAGACATAGCTTTTCCACAGCTGAGGCCCCTGTGGGCTAAATATGTCAACTTTTCAGACAAGTTCATCAAGAGCTGTAATATTCGACCATCATAA 1602 0.4345 MQLHISPSLRHVTVLPAKGFKDFIKVKIASRKVSYRMLFYVLLLFTFLLRFVFVLTAVDSIDGNFKCSTIGCLGKKIGPRILGRKLESNVPEVIYKVLDEPVEKDEVEGRSDIPQTLEDFMTDMKEGGYDAQTFAAKLREMVILMEKRTRTAKIQEYLYRHVASSSIPKQLHCLDLSLASEHTNNAQARLQLPPAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNSRRPSKVVLHIITDRKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQQVRSQFRGGSSAIVANSIEKPQVVAAKLQALSPKYNSMMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDVEMNGKVNGAVETCTGEDKFVMSKRLKSYLNFSHPLIAENFDPDECAWAYGMNIFDLEAWRNTNISLTYYHWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTSFSDAESAGVIHFNGRAKPWLDIAFPQLRPLWAKYVNFSDKFIKSCNIRPS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0883 533 CDD GT8_like_1 207 519 - -
Alju10g0883 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 84 530 IPR029993 GO:0047262
Alju10g0883 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 531 IPR029044 -
Alju10g0883 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 527 IPR029044 -
Alju10g0883 533 Pfam Glycosyl transferase family 8 210 506 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0883 Alju-ChrAlju10 8079822 8083406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0883 1 533 Glycosyltransferase AT5G54690 78.131 0.0 869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0643 02 4712584 4715724 Alju10g0883 10 8079822 8083406 CCT
Alju10g0883 10 8079822 8083406 Alju10g0883 10 8079822 8083406 ECH