Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0845 ATGGCGGCCCTGAAGCTGCTTCTCTCTCAAGCTCGCCGCCATTACCTCACCAATCATCATTCTCATTTCCACTCTTCCCTTTTTCTTGGCTGTCGGAGATCCCTTTGTTCTTCTTCACAATCCGATGAATCAGACTCAAAACCTCCACCCCCTCCAAGTAGACCCTCCCCAACCATTTCAATCCAGCCTGTTGCGTACCCGGTTAAACCTAAAGAGCCGTCACCTCCAGATACTACTGAATCCTCCGAAGCCCAATTACAAAATCAAACGCCGGCGCCTCCACCTCCTCTCCGTCCACGTGGACCAACATTGGCGGAAGATAATGCGGAATCACGGCGGGCTTGGACCAGGGAAGATATTCGGTATGTAAAGGACGCCGCGTCTTCGATATCGCCAGTGTCCTATCCTTTGAGAGTGGCGCCGCTTCCTGAAGATAAGACTACTGCTGGTGTTGAAGCAGGAAAGGATGATGGCGCGAAGGAGAACGAAGAAATTGAGAAGGAGATTAGAAAAATTAGGGCGGATGATCAGTTAAAGAGGAGAGTTATTAGAGCTGCAGAAGAGGAGAAGGTGCGGGTTCCTTTTCCAACACTGATAAAGGTGAAGCAAAAGGAGAAGTCGCCTATCCTTGATTTGACGGAGGCACTTCGCCAGGTTAAGGCCAACGCAAAGGCAAAATTTGATGAAACTGTTGAAGTGCATGTAAGATTGGGTATTGAATCAAAGCGAACAGAACTGGCAGTTCGTGGTACTATGATCCTGCCTTATGGTGCCCCTAAGGCCATCAGTGTGGCTGTTTTTGCAGAAGGAGCTGATGCGGAGGAAGCTAGAGCTGCAGGAGCTGATATAGTTGGTGGTAAAGAGCTTATTGAGGAGATTGCGAATGGTACTAACAAGCTTAGAGTTGACAAGTGCTTCTCAACTCCAGGAATGGCACCTCATCTTGGAAAGATAGCACAATACCTTAGAAAGCGTAGATTAATGCCAGACAAGAAACTAGGTACTCTGACCAGTGATATTCCTGGGCAATTGAAAGAGCTTAGACGTGGTCGTGTTGACTTTAAAATGGAGAGTAAATCAATTGTGCATGCAGGGATCGGAAAGGTAAGCTTCAGAGAGGATCAATTACGTGAAAACATAGGTGCATTCATGAATGCTCTATTGGCTGCCAAACCTGCTGGCTTAAAGAAGACTTCAAAATATGCTGGTTATGTCCTATCTGTCAATATGTGTAGCACGATGGGCCCAGGATTCCCTGTTTCAATACAATCCTTATCAAGAGCAGCTGATAATTACAAGTCTCTGAATCTGGTATGA 1317 0.467 MAALKLLLSQARRHYLTNHHSHFHSSLFLGCRRSLCSSSQSDESDSKPPPPPSRPSPTISIQPVAYPVKPKEPSPPDTTESSEAQLQNQTPAPPPPLRPRGPTLAEDNAESRRAWTREDIRYVKDAASSISPVSYPLRVAPLPEDKTTAGVEAGKDDGAKENEEIEKEIRKIRADDQLKRRVIRAAEEEKVRVPFPTLIKVKQKEKSPILDLTEALRQVKANAKAKFDETVEVHVRLGIESKRTELAVRGTMILPYGAPKAISVAVFAEGADAEEARAAGADIVGGKELIEEIANGTNKLRVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTSDIPGQLKELRRGRVDFKMESKSIVHAGIGKVSFREDQLRENIGAFMNALLAAKPAGLKKTSKYAGYVLSVNMCSTMGPGFPVSIQSLSRAADNYKSLNLV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0845 438 CDD Ribosomal_L1 212 420 IPR028364 -
Alju10g0845 438 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Alju10g0845 438 Pfam Ribosomal protein L1p/L10e family 220 416 IPR028364 -
Alju10g0845 438 Gene3D - 257 350 IPR016095 -
Alju10g0845 438 Coils Coil 155 175 - -
Alju10g0845 438 SUPERFAMILY Ribosomal protein L1 203 421 IPR023674 -
Alju10g0845 438 MobiDBLite consensus disorder prediction 36 112 - -
Alju10g0845 438 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 124 431 - -
Alju10g0845 438 Gene3D - 213 420 - -
Alju10g0845 438 FunFam 50S ribosomal protein L1 257 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0845 Alju-ChrAlju10 7594076 7598232 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0845 10 7594076 7598232 Alju10g0845 10 7594076 7598232 ECH