Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0834 ATGACGACGACGACGACGACTAGGAACATTGAGAAGATGGGTTCCATTGATGCTCAGCTGAGGTTGCTGGCGCCGGGAAAGGTGTCTGATGATGATAAGCTTGTCGAGTATGATGCTTTGTTGATGGACCGATTCCTCGACATTCTTCAGGATCTTCATGGTGAAGACATCAGAGAAACGGTTCAAGATTGCTATGAGCTGTCAGCTGTATATGAAGGGGAGCATGACCCTGACAAGCTGGAGGAGCTTGGGAACAAGCTGACTGGTCTTGACGCCGGCGACTCTATCGTGGTGGCCAAATCATTTTCTCACATGCTCAATTTGGCCAACTTGGCCGAGGAAGTCCAAATTGCCTACCGAAGAAGGATCAAGTTATTAAAGAAGGGCGATTTCGCCGATGAGAACTCGGCCATAACCGAATCTGACATCGAAGAGACCTTCAAGAGACTCGTCAATCAACTCAACAAGACCCCTCGTCAGGTGTTTGAGGCTTTCAAGAACCAAACCGTAGATCTGGTCCTCACTGCTCATCCTACTCAGGCTGTCCGTAGATCTCTGCTTCAAAAGCATTCCAGGATAAGGAGTTGCTTAACTCAATTGTATGCTAAGCATATAACACCTGACGATAAGAAGGAACTCGATGAGGCCTTACAAAGAGAGATTCAAGCTGCATTTCGTACGGATGAAATTAGGAGGAGTCCTCCCACGCCTCAAGACGAGATGAGGGCAGGAATGAGCTACTTTCATGAAACAATCTGGAAAGGTGTGCCTAAGTTTTTGCGCCGGGTCGACACGGCTCTCAAGAACATTGGAATAAATGAACGTGTGCCATATAATGCCCCTGTTATTCAATTCTCTTCTTGGATGGGAGGGGATCGTGATGGAAACCCCAGAGTAACCCCAGAAGTTACAAGAGATGTTTGCTTGTTGGCTAGAATGATGGCTGCTAATTTGTACTTCTCTAAAATAGAAGACCTTATGTTTGAGTTGTCTATGTGGCGTTGCAACGACGAGCTCCGTGTTCGTGCTGATCAACTCCATAGTTCATCAAAGAGAGATGCAAAACATTTTATAGAGTTCTGGAAGCAGATTCCTCCTAATGAACCATATCGTGTTATCCTCGGTGACGTGAGAGACAAACTATATAACACTCGTGAACGCTCTCGCCAAATATTAGCTGATGGGACCTCTGACATCCCTGAGGAGACAACCTTCACAAATGTTGAGCAGTTCATGGAGCCTCTTGAACTGTGCTACAGGTCACTCTGTGCATGTGGTGACAGATCAATAGCTGATGGAAGCCTCCTTGATTTCTTACGGCAAGTTTCAACTTTTGGACTGTCACTTGTAAGGCTTGACATTCGTCAAGAATCAGACAGGCACACTGATGTAATGGATGCAATAACAAGGCACTTGGATATCGGTTCTTACCGAGAATGGTCTGAGGAACGCCGCCAGAAATGGCTCTTGTCTGAGCTCAGCGGCAAGCGTCCTCTCTTTGGCCATGATCTTCCAAAAACTGAAGAAATGTCTGATGTGTTGGAAACCTTCCATGTCATCTCCGAACTTCCACCAGACAATTTTGGTGCCTACATCATCTCAATGGCAACATCTCCATCTGATGTGCTTGCTGTTGAGCTTTTACAACGAGAATGCCAAGTGAAGAAGCCATTAAGGGTTGTCCCATTGTTTGAAAAACTCGCTGATCTTGAGGCTGCTCCCGCCGCTCTCGCTCGTCTTTTCTCTATAGATTGGTACAGAAACCGAATTAACGGGAAGCAAGAAGTTATGATAGGATACTCAGACTCAGGGAAGGATGCCGGCCGGCTTTCTGCGGCTTGGGCGCTATACAAAGCTCAAGAAGAGCTCATAAAGGTTTCAAAGAAGTTTGGCATTAAGCTGACAATGTTCCATGGCAGGGGAGGAACTGTTGGAAGAGGAGGAGGTCCTAGTCATCTTGCAATACTATCTCAGCCGCCAGAGACCATTCATGGATCACTTAGAGTAACGGTTCAAGGTGAAGTCATTGAGCAGTCATTTGGGGAAGAACACTTGTGCTTTAGGACACTTGAAAGATTCACTGCTGCTACATTAGAGCATGGAATGCATCCTCCTGTGTCTCCAAAACCAGAATGGCGAGCTCTCATGGATGAAATGGCAGTTATTGCAACAAACGAGTATCGCTCTTTTGTTTTCCAAGAACCCCGTTTCGTCGAGTACTTCCGAAGCGCAACACCTGAGTTAGAGTATGGACGCATGAACATTGGAAGCCGACCTTCGAAAAGAAAGCCAAGCGGAGGAATTGAATCACTCAGAGCTATTCCTTGGATCTTTGCTTGGACTCAAACTAGGTTTCACCTACCAGTATGGCTTGGCTTTGGTTCAGCATTCAAGCAAGTGATTGAGAAGGATTCCAAGAATCTCCATATGCTTAGAGATATGTATAATCAATGGCCTTTCTTCAGAGTAACCCTTGATTTGATTGAGATGGTGTTTGCCAAAGGAGACCCAGGAATTGCTGCTTTATATGACAAACTCCTAGTGTCACCAGAGCTAGAGCCACTTGGAGAGTGCTTAAGGTCTAAATATGAAGAAACCAAAAGCCTTCTTCTCCAGGTTGCTGGGCACAGAGATGTTCTTGAGGGAGACCCATACTTGAAGCAAAGACTGAGGCTTCGTGATTCGTACACGACGGCTCTGAATGTGTTGCAAGCTTACACGTTGAAGCGAATACGTGATCCAGATTACCATGTGAAGCTGAGGCCGCATTTATCAAAGGAGTACATGGAATCAAGCAAAGCAGCTGCAGAACTTGTGAAACTGAACCCAACAAGCGATTATGCTCCTGGTTTGGAGGACACTCTCATTTTGACCATGAAGGGTGTTGCTGCTGGCATGCAAAACACTGGCTAA 2913 0.4607 MTTTTTTRNIEKMGSIDAQLRLLAPGKVSDDDKLVEYDALLMDRFLDILQDLHGEDIRETVQDCYELSAVYEGEHDPDKLEELGNKLTGLDAGDSIVVAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAITESDIEETFKRLVNQLNKTPRQVFEAFKNQTVDLVLTAHPTQAVRRSLLQKHSRIRSCLTQLYAKHITPDDKKELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSKIEDLMFELSMWRCNDELRVRADQLHSSSKRDAKHFIEFWKQIPPNEPYRVILGDVRDKLYNTRERSRQILADGTSDIPEETTFTNVEQFMEPLELCYRSLCACGDRSIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITRHLDIGSYREWSEERRQKWLLSELSGKRPLFGHDLPKTEEMSDVLETFHVISELPPDNFGAYIISMATSPSDVLAVELLQRECQVKKPLRVVPLFEKLADLEAAPAALARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELIKVSKKFGIKLTMFHGRGGTVGRGGGPSHLAILSQPPETIHGSLRVTVQGEVIEQSFGEEHLCFRTLERFTAATLEHGMHPPVSPKPEWRALMDEMAVIATNEYRSFVFQEPRFVEYFRSATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGSAFKQVIEKDSKNLHMLRDMYNQWPFFRVTLDLIEMVFAKGDPGIAALYDKLLVSPELEPLGECLRSKYEETKSLLLQVAGHRDVLEGDPYLKQRLRLRDSYTTALNVLQAYTLKRIRDPDYHVKLRPHLSKEYMESSKAAAELVKLNPTSDYAPGLEDTLILTMKGVAAGMQNTG 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0834 970 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 596 608 IPR033129 -
Alju10g0834 970 FunFam Phosphoenolpyruvate carboxylase 1 313 448 - -
Alju10g0834 970 Gene3D Phosphoenolpyruvate/pyruvate domain 313 448 - -
Alju10g0834 970 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 37 970 IPR015813 GO:0003824
Alju10g0834 970 PRINTS Phosphoenolpyruvate carboxylase signature 636 665 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju10g0834 970 PRINTS Phosphoenolpyruvate carboxylase signature 225 241 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju10g0834 970 PRINTS Phosphoenolpyruvate carboxylase signature 445 465 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju10g0834 970 PRINTS Phosphoenolpyruvate carboxylase signature 768 794 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju10g0834 970 PRINTS Phosphoenolpyruvate carboxylase signature 285 300 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju10g0834 970 PRINTS Phosphoenolpyruvate carboxylase signature 594 614 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju10g0834 970 PRINTS Phosphoenolpyruvate carboxylase signature 172 185 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju10g0834 970 Pfam Phosphoenolpyruvate carboxylase 41 970 IPR021135 GO:0006099|GO:0008964|GO:0015977
Alju10g0834 970 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 173 184 IPR018129 -
Alju10g0834 970 Hamap Phosphoenolpyruvate carboxylase [ppc]. 27 970 IPR022805 GO:0006099|GO:0008964|GO:0015977
Alju10g0834 970 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 970 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0834 Alju-ChrAlju10 7347281 7351227 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0596 02 4332636 4337181 Alju10g0834 10 7347281 7351227 CCT
Alju10g0834 10 7347281 7351227 Alju10g0834 10 7347281 7351227 ECH