Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0733 ATGATCTTGTCGGAGAGATCCAAGTACCCGAATCAGAGCAAAAAGGGTGTCTGGGAATCTCTCCAATCTCCTAAATCTCGCTGTTCTTCGCTGTCCTGTATATTCAGAAGAATGGTGGCTGGAAATGGTCTGTTTTACCCTATTCTTGGTTTTGTTTCCTGTGTGGTTTTCATATACATGTCTTTTGGAGACTTGAGGCCGAGTTTAAGGGAAGAAGCGACCTTGTATTTTGTGAAGAGAAATGGGACTCAGTTAATGTTAGATGGCAGACCTTTCTACATCAATGGTTGGAACTCTTACTGGTTTATGGTTCAGTCTGTGGACGAATCTTCCAGACTCAGGGTTCGTGCGATGCTTCAAGCTGGTGCGAAGATGGGTCTCACTGTTTGTAGAACTTGGGCTTTTAATGATGGCGACTACAATGCCCTTCAGATTTCCCCTGGTCGGTTCGATGAGCGAGTTTTCCAGGCCTTGGATTATGTCATAGCTGAAGCAAGGCAACAAGGAATTCGGCTGCTCCTTGCCTTGGTCAATAACTTGCATGCCTATGGTGGGAAGACTCAGTATGTCAAATGGGCATGGGAAGAAGGGATAGGGTTAAGCTCATCCAATGATTCTTTCTTTTATGATCCATCAATCCGCAGTTATTTCAAGAATTATGTTAAGACTGTTCTCACAAGGAAGAATACTATCACTGGAGTTGAATATAGAAATGATCCCACTATATTAGGCTGGGAATTAATTAATGAACCTCGTTGCATGAGTGATCCTTCAGGTGACACTCTCCAAGACTGGCTTGAAGAAATGTCTGCTTTTGTCAAAATGATAGACAAGAACCATTTGGTGACTATTGGTCTTGAAGGATTTTATGGTCCTGATGACCCAAAAGGCCCTACTGTGAACCCAGAGGAGTGGGCATCCAGGCTTGGATCTGACTTTATTCGCAATTCTGGGATTGAAAATATCGATTTCACCTCTGTTCATATCTATCCTGACCATTGGTTAAAAACGCATGACTTTGAAGTGAACCTGCGTTTTGTCACCAAGTGGATGCATTCACACATCGAAGATGGCGACAAAGTATTGAAGAAGCCTGTTTTGTTCTCTGAATATGGGTGGTCAGATTTGATCAAGAACTTTTCGGTATCAGACCGTGAAAGGATGTACAGATCAATTTTGGACATAATCTACAAATCTGCTAAGAAAAACAGGTCCGGAGCGGGTGCCTTAGTGTGGCAATTCTTAGTAGAAGGAATGAACGAGTTCAAGGATGATTTCTGGATGATCCCAATGAAAGGTTCATCAACTTATTCTCTATTTCTTGAACAATCGTGCAGATTGGCCAAAATCACAGGATGGGCTACTCAACAGGACACAAGTTTCAAAGATGCATGTAAGAAAATTTAA 1407 0.4222 MILSERSKYPNQSKKGVWESLQSPKSRCSSLSCIFRRMVAGNGLFYPILGFVSCVVFIYMSFGDLRPSLREEATLYFVKRNGTQLMLDGRPFYINGWNSYWFMVQSVDESSRLRVRAMLQAGAKMGLTVCRTWAFNDGDYNALQISPGRFDERVFQALDYVIAEARQQGIRLLLALVNNLHAYGGKTQYVKWAWEEGIGLSSSNDSFFYDPSIRSYFKNYVKTVLTRKNTITGVEYRNDPTILGWELINEPRCMSDPSGDTLQDWLEEMSAFVKMIDKNHLVTIGLEGFYGPDDPKGPTVNPEEWASRLGSDFIRNSGIENIDFTSVHIYPDHWLKTHDFEVNLRFVTKWMHSHIEDGDKVLKKPVLFSEYGWSDLIKNFSVSDRERMYRSILDIIYKSAKKNRSGAGALVWQFLVEGMNEFKDDFWMIPMKGSSTYSLFLEQSCRLAKITGWATQQDTSFKDACKKI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0733 468 Gene3D Glycosidases 75 451 - -
Alju10g0733 468 FunFam Mannan endo-1,4-beta-mannosidase 6 74 451 - -
Alju10g0733 468 ProSitePatterns Glycosyl hydrolases family 5 signature. 243 252 IPR018087 GO:0004553|GO:0005975
Alju10g0733 468 SUPERFAMILY (Trans)glycosidases 77 440 IPR017853 -
Alju10g0733 468 PANTHER - 47 460 IPR045053 GO:0004553
Alju10g0733 468 Pfam Cellulase (glycosyl hydrolase family 5) 89 413 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0733 Alju-ChrAlju10 6224295 6228323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0733 40 452 Glycoside Hydrolase AT2G20680 70.218 0.0 625
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0733 10 6224295 6228323 Alju10g0733 10 6224295 6228323 ECH