Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0684 ATGGCTGATCAAGAGAGCAATGGTATTGGGGTTGCAGACACCTTCGCTCTGGTGCTCGAGGACTGTTCCTTCGACGGGTTGGATCGAAGTCCTGTTGTTTCTAATGGCGTGAGGAAGGTGGAGGAGAGAGCCGAGTGTGAACATTTGGGGATTTTGAGTTGTATGGTTGAGCAAGAAATGAGGAACGATGCTGAGCCAATTGCTATGGAATCTGCTCGTATCTTGAAAGCGGACGGAGAAGCGTGTGAACGTTTGGGGGTTTCGGGTTGTAATATTGAGACAGGTTTAGGAAGTATTAATTTAGCTGATGGCCTTCATAGTTCTCAGCAGGAAATGAGAAACGTTGCTGGGCCAATTACTGTTGAATCTACTTGTACCGCGGAAGTGGATGGTGAAGTGCGTCAAAAATTGGGGGCTTCGGGTTGTAACAGTAATATTGAGGAAGGTGTGGGAAGAATTAGTTCGGTTAGTGGGCTTGGAAGCTGTGTTATAATTGGAAAGAATGATCGGAAGAGTGAGATAAAGATGGATGAGGGTGAGAGTGAAAGTTCAGAGTCCGAGAGTGATAATCCATCTTCACTAAGATCTGCGTCATCTAGTAGTAGCAGTGATAGTGACGATACTTCAACTAGTGGTGGTTCTAGTGACGATGACGATAGTGAAGATAGTGAGGAAGAGGAACGTCAGGAGGAAGAAAAAATGACAAAAAAGATTGAAGTGGAAACTGAAGAAGGTGAGATAAAAGACTCTGGTGGGCAAGAGCCGGGTGCTGACACTGCCGCCAGTGATGATGAAGATGCAGGGGAGGTTTCTTGGAGTGTCATTAATGATGAAGATGATGAAGATGACATTGCTAAGGAAGGGCCCATCAGGTCAAAGAACGAGCTCAAGGATCTTCCTTCAGTTCCTCCAGTAAACGTGACCTTAGAACCACACCATCAAATGCTGCCAGTAGGAGTTGTTATGTCGATAGTCGGCTCCCAAGTCATTGTGGAAGGGATGGAGAAGCATGATCCTCTTGATGAGGGGTCCATTCTCTGGATAACTGAAACCCGAACACCACTAGGTTTGGTTGATGAAATTTTTGGACCTGTCAGAAACCCCTACTATACTGTGAGATACAATTCTGAAAATGAAATCCCCAAGGGTGTCCATGTGGGTACTTCGATCTCTTTTGTTGCGGAATTCGCCGATCATGTGCTTAACAACAAGGACCTTTACAAGAAAGGCTATGATGCTTCTGGTTTGAATGATGAAGAGGAGTCTGATGAAGCAGAGTTTTCGGACGATGAGAAAGAGGCTGAGTATAGGAAAATACACAAAATGATGAAGAGAGGTATGAGTGATAAGAATCATGGAAAGCAATCAAAGCATAAAAACAACAAAGAGAAGGCTTCGAGGAACAATGGCCCTGCGGCACCTCCCTACCCTGTCCCATCTTCTTCAACGCATAATCATGAGAAGTTTCCTCCATTTTCAGGCATCAGACCAGGTCCTTTCGTGGCAGCACCGATTGTTCCACCTTTCCCACCTCCAAATTCTGGCCCTAATTTAGCTCCAAACGGAGTTTGGACAAATGGGATGTCACTTATCCAGCCACAAACTGCTCTGCTTCCTAATGGCATATCTCTGTTCCCAGGAAATGCGCAAAATCCTTATCAGTTGCCAATGACAGGAATCCCATTTCAACCGCAGTTCGGCCCCAAGCCGCCTCCAGGAACTGATATATTTGCCCAATCTATGTGCTACCCACAGGGGCTTCTTGGGGCACATCCAATGACTTTTGGGATGAACTTGCCGCAGATTCAGGCATCTGTAAGTGGTGGTGGAGAACAAGGTTTTTCACCGTACGGAATGCAACCAGAAAGAAATCATAATTTTCAGTCAGGTCCTGAAAATCTCCATGCTCCCAATCAATTTAGACCCGGTGGCTCTGGTAATCGTGGAAGGAGAAACTTTCATCAAAGGGGAAGGAAGAGCTGGCGACCAACAAAGTAA 1998 0.458 MADQESNGIGVADTFALVLEDCSFDGLDRSPVVSNGVRKVEERAECEHLGILSCMVEQEMRNDAEPIAMESARILKADGEACERLGVSGCNIETGLGSINLADGLHSSQQEMRNVAGPITVESTCTAEVDGEVRQKLGASGCNSNIEEGVGRISSVSGLGSCVIIGKNDRKSEIKMDEGESESSESESDNPSSLRSASSSSSSDSDDTSTSGGSSDDDDSEDSEEEERQEEEKMTKKIEVETEEGEIKDSGGQEPGADTAASDDEDAGEVSWSVINDEDDEDDIAKEGPIRSKNELKDLPSVPPVNVTLEPHHQMLPVGVVMSIVGSQVIVEGMEKHDPLDEGSILWITETRTPLGLVDEIFGPVRNPYYTVRYNSENEIPKGVHVGTSISFVAEFADHVLNNKDLYKKGYDASGLNDEEESDEAEFSDDEKEAEYRKIHKMMKRGMSDKNHGKQSKHKNNKEKASRNNGPAAPPYPVPSSSTHNHEKFPPFSGIRPGPFVAAPIVPPFPPPNSGPNLAPNGVWTNGMSLIQPQTALLPNGISLFPGNAQNPYQLPMTGIPFQPQFGPKPPPGTDIFAQSMCYPQGLLGAHPMTFGMNLPQIQASVSGGGEQGFSPYGMQPERNHNFQSGPENLHAPNQFRPGGSGNRGRRNFHQRGRKSWRPTK 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0684 665 MobiDBLite consensus disorder prediction 173 297 - -
Alju10g0684 665 FunFam H/ACA ribonucleoprotein complex non-core subunit NAF1 287 393 - -
Alju10g0684 665 MobiDBLite consensus disorder prediction 211 228 - -
Alju10g0684 665 MobiDBLite consensus disorder prediction 619 635 - -
Alju10g0684 665 MobiDBLite consensus disorder prediction 186 210 - -
Alju10g0684 665 MobiDBLite consensus disorder prediction 259 284 - -
Alju10g0684 665 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 139 621 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Alju10g0684 665 MobiDBLite consensus disorder prediction 651 665 - -
Alju10g0684 665 MobiDBLite consensus disorder prediction 413 494 - -
Alju10g0684 665 SUPERFAMILY Translation proteins 315 384 IPR009000 -
Alju10g0684 665 MobiDBLite consensus disorder prediction 229 251 - -
Alju10g0684 665 Gene3D Probable tRNA pseudouridine synthase domain 287 394 IPR038664 -
Alju10g0684 665 Coils Coil 224 244 - -
Alju10g0684 665 MobiDBLite consensus disorder prediction 431 456 - -
Alju10g0684 665 Pfam Gar1/Naf1 RNA binding region 316 396 IPR007504 GO:0001522|GO:0042254
Alju10g0684 665 MobiDBLite consensus disorder prediction 606 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0684 Alju-ChrAlju10 5678264 5681029 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0684 10 5678264 5681029 Alju10g0684 10 5678264 5681029 ECH