Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0621 ATGGCGGGGAAGATTGGGTTTGAAGACTTGTTGCCTGTGATGGCTAATAAGCTTGGAGGAGAAGGTCTAATAAAGGAGCTGTGTAATGGGTTTGAGTTGCTGATGGACAAAGACAAAGGAGTTATCACTTTGGATAGCTTGAGAACAAACTCTGCTCTTCTGGGTCTTCAGGACTTGAAGGAGGACGAGCTTGTGAGCATGATGCAGGAAGGAGATCTCGACGGCGACGGCGCTCTCTCTCAAATGGAGTTCTGTGTTCTCATGTTTAGATTAAGCCCTGATTTGATGGCTCACTCTTGGCTTTGGCTCCAACACGAACTCGATCATCAACCCTCTCCCAAATGA 345 0.4725 MAGKIGFEDLLPVMANKLGGEGLIKELCNGFELLMDKDKGVITLDSLRTNSALLGLQDLKEDELVSMMQEGDLDGDGALSQMEFCVLMFRLSPDLMAHSWLWLQHELDHQPSPK 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0621 114 Gene3D - 5 112 - -
Alju10g0621 114 Pfam EF-hand domain pair 39 90 IPR002048 GO:0005509
Alju10g0621 114 SMART efh_1 63 91 IPR002048 GO:0005509
Alju10g0621 114 PANTHER CALCIUM-BINDING PROTEIN KIC 4 109 IPR044205 GO:0005509
Alju10g0621 114 ProSitePatterns EF-hand calcium-binding domain. 72 84 IPR018247 -
Alju10g0621 114 ProSiteProfiles EF-hand calcium-binding domain profile. 59 94 IPR002048 GO:0005509
Alju10g0621 114 SUPERFAMILY EF-hand 3 103 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0621 Alju-ChrAlju10 5133435 5133779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0621 7 110 EF-hand Containing Proteins AT5G54490 61.905 1.16e-41 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0621 10 5133435 5133779 Alju10g0621 10 5133435 5133779 ECH