Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0571 ATGGATTACGGATACAAGATGCGAGTGGCGTTTGCGATCGCTTCTTTGGCGGTTGTTTCAATATACTTTACTGCTCGATACCGGAGTCGGCGTAAGCAGAAGTATCCACCGAGTTTGTGTTACTTACATACCGACCCAAAGCCACAGTATGCTTTTAAACGAGTATTAGCCGATAACTCGTACACTGTGTTCAAGCACTTGAAGCTCAACAACTCTGGTGGTGAGAGGCCCTCAAATTCCCATCCCTTTGAGGCAGAGATTACATCAGTACTTAAAGACCCTCAGCCTCAATTAGAATTCAGTACTGAGATTGAGGAACTGAAGAAGAAAGATACATATGTTTGGATTGATACAGAGTTTCAATTAAAGGAGCTTGTCAATGTATTACATAAAGAGAGGTTCTTTGCTGTGGACACAGAACAACATACTTTGCGATCTTTTCTTGGCTTTACAGCATTAGTTCAGATTTCTACTCAGCAGGAGGATTATTTGATTGACACAATTGCCTTGCATGATTTCATGGGCATTCTTCTCCCGGTTTTTGCAAATCCTTTAATTTGTAAAGTGTTTCATGGAGCTGACAATGATGTTGTCTGGCTACAAAGAGATTTTCATATCTACGTTGTAAATCTATTTGATACGTCAAAGGCATGTGAGGTGCTGTCAAAGCCACAGAAATCACTCGCATATCTACTTGAAACTTATTGTGGAGTTACAACAAATAAATTGTATCAGCGTGAAGACTGGAGACAACGTCCCCTCTCAGCAGCAATGTTACAATATGCAGAAACAGACGCACACTATTTGTTATATATTGCAAATTGTTTGATCACTGAGCTCAAACTGCTGGACGATGAAAACTCTGGTTCCAATGACAAATTCCATTTTCTTCATGAGGCTAGTCGACGTTCCAACATGACTTGTTTGCAACTTTTCACAAAAGAGATTGAAGCTTCTCCTGGGGAATCTGCTGCATTATCATTATTTTCACGATATGTGGGTGGTGAGAGTTCTTCAGTTTCCAGTGAAACCCAGTTTCAGAATTTTGTGAGGCGACTATGTGCATGGAGAGATCTGATGGCTCGCGTCCATGATGAGAGCTTGAAATATGTATTATCAGACCAGTCAATTGTTGCTTTGGCAAATCGGCCTCCAACGAGTGACTCTGAAATAAGCAGTGTCATAGCTCAGGCTGATATCAATATAGAAATGGGTGCCAATTCTTTCTTCTCTTCTCCATCTCCTATAGTTGTCAGCCACCTAAGTGATGTCTATGATTTGGTTACAGACAATTTAGGTAACACTGAAGATATTTATTCAGTAATTCTTCAGAAGTGCCTTGGTTCCAATGGGAGCTGTCCAATTTCTCTATTTAATTATTCTTTGTTGGTTAGCAGTAATCTGAGACCTATGATAGCCTATAAACACCATAGTGTAAAAAATTCAAAACAAGTTTCTCGGAAGGCATCTCGAGATTTGTTTGTTCAGAAATTCTCTTGTAAATCTCCTGTTTATCACAATTGTCGGATTTATGCTAATGATGGGCGGCTGCTTTGTTACTGTGATCGGAGGAAGCTTGAATGGTACCTCAGTCGGGATCTGGCAAAACTAATTGATGAAGATCCACCTGCTATAATGCTTCTTTTTGAACCAAAAGGTCGCCCAGAGGATGAAGACAATGATTTCTATATCCAGAGCAAGAAAAACATATGTGTTGGCTGCGGTGAAGGAAATCACTACTTGCGGTACCGGATAATCCCATCATGCTATAGAATACATTTTCCTGAGCATTTGAAAAGCCATCGTTCTCATGATATTGTCCTGCTTTGTGTGGACTGTCATGAAGTTGCTCATGCTGCTGCAGAGAAATACAAGAGAAAGATAGCAGCTGAATTTGGGATTCCTCTCTATGTTCAGAGGGTAATTGATCCAGGACAAGCATCTGATGTAACCTTTGAAGAGGGAGGTGTTTCTCCCTTACAGTTGCGAACAGCAGCCATGGCTCTTCTGCGCCATGGACCAAGAATGCCTCCCAATCGCCGTGATGAACTGACTGAGATTGTGAAGAGGTACTATGGAGGAAGGGAGATATCTGAGGAAGATTTGGAGAGAGCATTGCTAGTTGGCATGAGTCCACATGAGAGAAGGCGATTTGAGAAGAAAAGAGGATATTCATTTAAACATTTAATAAGAGGTGCTGCTGAGGAGACAGTACAGGAAAATCATGGTGATGGCACACCCACAATGGGAGTTAAGGACACATCAAATTTTAATGCTCTAGATGGTTCATCTGCAAATAAAGCAACAAGCAACGTAGTAGTTAGAGAACTTACTATGGTAAAGGATGATGTTCGAAACCCCGCTATATATTCTGATGTAGGAGTCAATGGAGCAGTCTCTGTTATTTCAACTGAACATGTGAACACAGAAAAAAATTCAGGTTCTAACGAGTTAAGTGCCTCTCTTATAAATCCTGATGATAGCTGTCTAGGCGGAGGGGCTGCAAATGGAATTGATGACTTATCCCCTAGAGATGAAGAGTCTGCTCAAGCGAATCATAATTCCAAACTGTCACTGTTGGGCCATGGACCACATGGAAAGCAAGTTGTTGAACATTTACTGAAGGAATATGGCGAGGATGGCATTCGTCAGTTTTGTCAGAGATGGAGACAAGTATTTGTTGAAGCTGTCAAACCACGGTTTCTACCTGCTGGCTGGGACATAAATCACAGTGGTAGAAGGGATTTCGGAGAATTCAGTGTCTACAATCCGCTCCGACAGGCATCTGCTACCGCTGCTTTCCAGTAA 2808 0.4145 MDYGYKMRVAFAIASLAVVSIYFTARYRSRRKQKYPPSLCYLHTDPKPQYAFKRVLADNSYTVFKHLKLNNSGGERPSNSHPFEAEITSVLKDPQPQLEFSTEIEELKKKDTYVWIDTEFQLKELVNVLHKERFFAVDTEQHTLRSFLGFTALVQISTQQEDYLIDTIALHDFMGILLPVFANPLICKVFHGADNDVVWLQRDFHIYVVNLFDTSKACEVLSKPQKSLAYLLETYCGVTTNKLYQREDWRQRPLSAAMLQYAETDAHYLLYIANCLITELKLLDDENSGSNDKFHFLHEASRRSNMTCLQLFTKEIEASPGESAALSLFSRYVGGESSSVSSETQFQNFVRRLCAWRDLMARVHDESLKYVLSDQSIVALANRPPTSDSEISSVIAQADINIEMGANSFFSSPSPIVVSHLSDVYDLVTDNLGNTEDIYSVILQKCLGSNGSCPISLFNYSLLVSSNLRPMIAYKHHSVKNSKQVSRKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLSRDLAKLIDEDPPAIMLLFEPKGRPEDEDNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKYKRKIAAEFGIPLYVQRVIDPGQASDVTFEEGGVSPLQLRTAAMALLRHGPRMPPNRRDELTEIVKRYYGGREISEEDLERALLVGMSPHERRRFEKKRGYSFKHLIRGAAEETVQENHGDGTPTMGVKDTSNFNALDGSSANKATSNVVVRELTMVKDDVRNPAIYSDVGVNGAVSVISTEHVNTEKNSGSNELSASLINPDDSCLGGGAANGIDDLSPRDEESAQANHNSKLSLLGHGPHGKQVVEHLLKEYGEDGIRQFCQRWRQVFVEAVKPRFLPAGWDINHSGRRDFGEFSVYNPLRQASATAAFQ 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0571 935 Gene3D HRDC domain 336 439 IPR044876 -
Alju10g0571 935 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 41 924 IPR045092 GO:0000175|GO:0000467
Alju10g0571 935 Pfam 3'-5' exonuclease 113 280 IPR002562 GO:0003676|GO:0006139|GO:0008408
Alju10g0571 935 FunFam Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain 46 318 - -
Alju10g0571 935 MobiDBLite consensus disorder prediction 834 862 - -
Alju10g0571 935 Pfam HRDC domain 348 394 IPR002121 GO:0003676
Alju10g0571 935 Gene3D - 45 318 IPR036397 GO:0003676
Alju10g0571 935 SMART hrdc7 343 428 IPR002121 GO:0003676
Alju10g0571 935 SUPERFAMILY HRDC-like 346 400 IPR010997 GO:0000166|GO:0044237
Alju10g0571 935 SUPERFAMILY Ribonuclease H-like 47 311 IPR012337 -
Alju10g0571 935 ProSiteProfiles HRDC domain profile. 343 423 IPR002121 GO:0003676
Alju10g0571 935 SMART 35exoneu6 113 281 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0571 Alju-ChrAlju10 4689669 4696846 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0571 10 4689669 4696846 Alju10g0571 10 4689669 4696846 ECH