Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0536 ATGCTAATAGCCCAATTCTTTCATGAGCTTGAATTTGGGCCTTCTGACCTTCCAATGGATCTGGGTCATGTTTGCACTACTCCTCTTAAATGTCTTGGCCACAACTACCAAGGACTTAGTAGTTATTACCAACTTAGACCCCAAGCTAAAGCTAGCCTTCTCTCTCAGGTCTCTGATTCCTGTGCATTCTCTCCCACCGTCGCCATGGATCGTCGCATCCATGGCGTCACCACGCTTCGCATCTCTCTTCTCATTCTTCTCTCCGGCTTCTCCTTTCTCGCATTCTCCGATTCTCCAAATCCCAGATTGACGGTGGCTTCTTCTTCCTCGGTTCAGATAAACTCCAACTCAGTTCTGGTGGCTCTTCTGGACTCGCATTACACGGAACTCTCTGAGCTGGTCGAGAAGGCTATGCTTCTGCAGACTCTCGAAGACATTGTTGGTGCCCACAACATCACCATCTTCGCGCCCAGAAACGAAGCTCTCGAGCGCGATCTCGACCCTGAGTTCAAGCGCTTCCTTCTTGAACCCGGTAATCTCAAGTCTCTTCAGTCCTTGCTCATGTTTCATATCATTCCCACTCGAATCGGATCGCAGGCGTTGCCCACTCACACCGGGTCAGCCCGTCACGAGACGCTCTTTAAGACCGAGTTCGTTCACCTTGCCAATAATGGGACCGGGGAATGGACAGTGGATCGCGCCAAGATTATTCACCCTGATGTTGTCTCCCGACCCGACGGAGTGATCCACGGGATTGAGCGCCTCCTGGTCCCTCGTTCCGTCCAAGATGACTTCAACCGCCGGCGGAGTCTTCAGTCCATTACGGCGGTGAAGCCCGAGGGAGCGCCAGAGGTTGACCCGAGGACGCATCGGCTCAAGAAGCCGGCTTCGCCTGTAAAACCAGGTTCGCCGCCGGTTTTGCCCATTTTCGATGCCATGGCTCCGGGACCCTCTCTGGCGCCCGCCCCAGCACCTGGTCCCGGTGGACCACACCACCATTTCAACGGCGAAGCTCAGGTCAAGGATTTCATTCAGACACTTCTTCATTACGGTGGGTACAATGAAATGGCCGACATTTTGGTGAATCTGACTTCCTTAGCTACCGAAATGGGTCGGTTGGTGTCTGAGGGCTATGTCCTAACTGTTTTGGCTCCGAACGATGAAGCAATGGCTAAACTAACCACGGACCAGCTGAGCGAACCGGGTGCTCCGGAGCAGATAATGTACTACCATCTAATACCCGAATATCAAACCGAAGAGAGTATGTATAATTCAGTTCGAAGGTTCGGAAAAGTCCGGTATGATACTCTCCGGTTGCCGCATAAAGTGGTAGCTCAGGAGGCAGACGGGTCGGTCAAATTCGGGCAGGGAGACGGATCGGCTTATTTGTTCGACCCCGATATATACACGGACGGTCGTATCTCGGTTCAGGGTATAGACGGGGTTTTGTTCCCACCAGAGGAGGAGGAAAAGCCGGTCACCCGGACGGTTCAACCCGCCAAAGTCGTAGTCAAGCATAGAAGAGGAAAATTGCTGGAAGCTGCTTGCTGGATGCTTGGAACCTTTGGACAGGATTCTAGATTCACCACTTGCCATTGA 1599 0.5266 MLIAQFFHELEFGPSDLPMDLGHVCTTPLKCLGHNYQGLSSYYQLRPQAKASLLSQVSDSCAFSPTVAMDRRIHGVTTLRISLLILLSGFSFLAFSDSPNPRLTVASSSSVQINSNSVLVALLDSHYTELSELVEKAMLLQTLEDIVGAHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQSLLMFHIIPTRIGSQALPTHTGSARHETLFKTEFVHLANNGTGEWTVDRAKIIHPDVVSRPDGVIHGIERLLVPRSVQDDFNRRRSLQSITAVKPEGAPEVDPRTHRLKKPASPVKPGSPPVLPIFDAMAPGPSLAPAPAPGPGGPHHHFNGEAQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNSVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEEEEKPVTRTVQPAKVVVKHRRGKLLEAACWMLGTFGQDSRFTTCH 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0536 532 SUPERFAMILY FAS1 domain 115 259 IPR036378 -
Alju10g0536 532 Gene3D FAS1 domain 117 259 IPR036378 -
Alju10g0536 532 SUPERFAMILY FAS1 domain 319 487 IPR036378 -
Alju10g0536 532 MobiDBLite consensus disorder prediction 278 304 - -
Alju10g0536 532 Pfam Fasciclin domain 375 485 IPR000782 -
Alju10g0536 532 Pfam Fasciclin domain 126 258 IPR000782 -
Alju10g0536 532 SMART fasc_3 153 259 IPR000782 -
Alju10g0536 532 SMART fasc_3 381 486 IPR000782 -
Alju10g0536 532 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 79 529 IPR044654 -
Alju10g0536 532 FunFam Fasciclin-like arabinogalactan protein 16 335 486 - -
Alju10g0536 532 ProSiteProfiles FAS1/BIgH3 domain profile. 114 256 IPR000782 -
Alju10g0536 532 ProSiteProfiles FAS1/BIgH3 domain profile. 340 468 IPR000782 -
Alju10g0536 532 Gene3D FAS1 domain 359 486 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0536 Alju-ChrAlju10 4390668 4397607 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0381 02 2869138 2875071 Alju10g0536 10 4390668 4397607 CCT