Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0523 ATGGGAAAGAATCAGAAGTCGGACCTTGGGAGGGCTTTGGTGAGGCAGCATAACCAAATGATCCAGCAGAGCAAGGAAAAGGGTCGTTTCTACAGGAATCAGCAGAAGAATATTTTGGAATCGGTCACAGAGGTCACCGACATTGATGCCATCATCGAACAAGCTGACGAGGCCGAGCGTCTCTTCATCGCCGACCAGTCTGGCCCTGACCTTCCCATTCGCCTGGATACAAGCTCTAGCACTAGTGAAATGACGCCGGAAGAGAGGAGAGATCTTCAGAAGAGAGAGGAGGCGCTGCATGCTGGCAGTCTTCGAGTTCCGCGCAGGCCGCCATGGAGTGTGAACATGTCCGTGGAGGAGCTTGATGCCAATGAAAGACAAGCTTTCTTGACTTGGCGTCGCAGTCTAGCAAGACTCGAGGAAAATGAGAAGCTAGTCCTTACACCCTTTGAGAAGAATCTTGATATTTGGAGACAGCTTTGGCGAGTCGTTGAGCGTAGTGATTTGCTTGTGATGGTTGTTGATTCGCGAGATCCGCTGTTTTACCGCTGTCCTGATCTTGAGGCATATGCAAGAGAGGTAGATGAGCATAAACGGACATTGCTGCTGGTTAACAAGGCTGATCTTTTACCCACACCTATTAGAGAGAAATGGGCAGAGTACTTCCGGGCTCATGATATTCTCTTCATCTTCTGGTCAGCTAAAGCTGCTACTGCTGCTCTGGAAGGAAAAAAGCTTCCTTTATCATCGGATGCTGAAAATTTGAAGAAGTCCTGTAACCCAGATATAAAAATATATGGCAGAGATGAGCTCCTGGCTCGGTTACAGTCAGAAGCAGAAGAGATTGTAGAGAGGAGAAAATCAAGCTCCTCTGACACAGGGCCTTCTGATGTTCAATCTCGTAGTGAAAATGCTTCCTGTACCTCGTCATCAAGTAATGTGGTTGTGGGATTTGTTGGTTATCCTAATGTGGGTAAAAGTTCAACCATCAATGCTTTGGTAGGCCAAAAACGGACAGGTGTCACCTCCACTCCAGGGAAGACAAAGCACTTCCAAACGTTAATTATTTCTGATAGGCTAACCCTTTGTGACTGTCCTGGGTTAGTTTTTCCATCTTTTACTAGCTCAAGATATGAGATGATTGCCTGTGGGGTGCTGCCCATTGATAGGATTACTGAACACCGGGAGGCTGTCCAGGTTGTTGCCGATAAAGTCCCAAGACATGTCATTGAGGAAGTTTATAGGATCACCCTTCCGAAGCCTAAGCCGTATGAACCCCAATCTAGGCCTCCTCTTGCGGCTGAACTTCTGAGAACTTATTGTGCTTCTCGTGGATATGTGGCCTCTAGTGGGCTACCCGATGAAACTAGAGCTGCCCGTCAGATACTGAAAGATTACATTGATGGAAAGTTGCCTCATTATGAAATGCCACCTGAAATGTCGAATGAGGAACAAGCTGTGGCCCAACCCGGAGGACTTGACTCAGTTAACTTAAACAAGTCAGATTCTTCCCATATTGAAAATTCTTCAGATGTGGAGAGTGAAGATGCCCCTAAGCTTGAGCACGTACTGGATGATCTCAATTCATTTGACATGGCTAATGACCTTGCTCCAAAGAAAGCTACTGTCAAGAAGTCTAACGCTTCTCACAAACATCACAAGAAGCCTCAGAGGAAAAAAGATCGTTCATGGAGAGTAGGAAATGATGATGATGATGGGATGCCAGTTGCCAGATTCTTTCAGAAACCAGTAAATACAGATCCAATGAATGTCTGA 1776 0.4628 MGKNQKSDLGRALVRQHNQMIQQSKEKGRFYRNQQKNILESVTEVTDIDAIIEQADEAERLFIADQSGPDLPIRLDTSSSTSEMTPEERRDLQKREEALHAGSLRVPRRPPWSVNMSVEELDANERQAFLTWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPTPIREKWAEYFRAHDILFIFWSAKAATAALEGKKLPLSSDAENLKKSCNPDIKIYGRDELLARLQSEAEEIVERRKSSSSDTGPSDVQSRSENASCTSSSSNVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDRLTLCDCPGLVFPSFTSSRYEMIACGVLPIDRITEHREAVQVVADKVPRHVIEEVYRITLPKPKPYEPQSRPPLAAELLRTYCASRGYVASSGLPDETRAARQILKDYIDGKLPHYEMPPEMSNEEQAVAQPGGLDSVNLNKSDSSHIENSSDVESEDAPKLEHVLDDLNSFDMANDLAPKKATVKKSNASHKHHKKPQRKKDRSWRVGNDDDDGMPVARFFQKPVNTDPMNV 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0523 591 FunFam Large subunit GTPase 1 376 477 - -
Alju10g0523 591 CDD HSR1_MMR1 156 371 - -
Alju10g0523 591 MobiDBLite consensus disorder prediction 537 591 - -
Alju10g0523 591 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 157 371 IPR030378 GO:0005525
Alju10g0523 591 Pfam 50S ribosome-binding GTPase 316 372 IPR006073 GO:0005525
Alju10g0523 591 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 565 IPR043358 GO:0003924
Alju10g0523 591 MobiDBLite consensus disorder prediction 544 561 - -
Alju10g0523 591 MobiDBLite consensus disorder prediction 473 517 - -
Alju10g0523 591 MobiDBLite consensus disorder prediction 283 308 - -
Alju10g0523 591 MobiDBLite consensus disorder prediction 292 308 - -
Alju10g0523 591 Coils Coil 272 292 - -
Alju10g0523 591 PRINTS GTP1/OBG GTP-binding protein family signature 316 336 IPR006073 GO:0005525
Alju10g0523 591 PRINTS GTP1/OBG GTP-binding protein family signature 362 377 IPR006073 GO:0005525
Alju10g0523 591 MobiDBLite consensus disorder prediction 562 576 - -
Alju10g0523 591 Gene3D - 375 477 IPR023179 -
Alju10g0523 591 Gene3D - 156 372 IPR027417 -
Alju10g0523 591 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 406 IPR027417 -
Alju10g0523 591 FunFam Large subunit GTPase 1 156 372 - -
Alju10g0523 591 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0523 Alju-ChrAlju10 4258016 4261718 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0523 10 4258016 4261718 Alju10g0523 10 4258016 4261718 ECH