Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0482 ATGATTATGGCGCCACGAAAAGCTCGCGAGCGTCAACTGCTCGTTGAGTCCATGTACTCTATCATTGCACTTCTCTTCCTCCTCGTTACTTGCGTTGAGCTCTGCGACGCCGCCTCCGTAGTCGACGTTTACCGCCTGATTCAGTATGATATGTCCGGGGCTCCATTCGGATCTCGACTCGCTAGCCTCAATCACCATGCCGGCTCTCTCCACTTCTCTCCCCATACTGATCTCTCACGCACTGTGCTCGTGATCCCGCTTCGCGAGTTGAACATAACTTTTGTCAAAGAATATATCGTTGAAAAGAAGCCACTGGGGGGTTTGTTATTTTTGCTGCCTAAGATGTTCAGTCTAGAAAATAAAGGTGGCATGAGAACTGATCATCAAGACGATGGCAAGGAGCAGCTGAAGAGTGTACTGGCTGAACTTGAACAGATACTAGTACACAATAACTTACCTTACCCTGTTTATTTTGCTTATGAGGATGACAACATTCATGCTGTGTTAGCTGATATAAAGAAAAATGATGCTACCGGCCAACCTGCTACTGCAACTAATGGCGGATACAAGTTTGTTGTTTCAGCTCCAGAGCCAAAGAAAGTCGCATCCCCCACAATTACAAATATTCAGGGATGGTTGGCCGGAAAGAAGACAGACGATGATGCTAGTCAATTACCCACCATTGCTATAGTGGCATCATACGACACTTTTGGGGCTGCTCCTGCATTGTCGGTGGGAAGTGATAGTAATGGAAGTGGTGTTGTGGCTCTCCTTGAAGTAGCTAGGTTGTTTTCTCTCCTCTATTCAAATCCAAAGACAAGAGGACATTACAATCTACTATTCGGACTGACATCTGGCGGGCCGTACAACTACAATGGAACTCGTAAGTGGCTTCGCAGTTTTGATCAACGTATGCGTGAAAGCATTGACTATGCCATCTGCTTGAATAGTATTGGCTCATGGGAAAAAGATTTGTGGATTCATGTGTCTAAGCCTCCAGAAAATGTCTATATAAAGCAAATTTTCGAAGATTTTTCTAGCGTGGCAGAAGAGTTGGGTTTTACTGTCAATCTGAAGCACAAGAAAATAAATATTTCGAATCCTCGAGTAGCTTGGGAGCATGAACAGTTCTCTAGGCTGAGAGTTACTGCTGCCACCCTTTCTGAACTCTCCACGGCACCTGACTTGCTAGAGAGGACTGGGGGCCTTGTTGACAGCAGGCTTTTCGTCAATGAAACAGCAGTTGTCAGAAGTGTGAAGTTAATTGCTGAGAGTCTTGCGAGGCATATTTACAGACATCAAGGAAAGAACATTCAGGTATTTGCAGACAACAGTAGTTTGGCTGTAAATCCTTCCTATATTCGATCATGGTTAAATGTTTTGTCCCAAACACCTCGGGTGGCACCATTTCTGCCAAAAGATGATCCTTTTGTCGCAGCACTGAAAAAGGAATTAGAAGATCACACTGACCAGGTTGATCTGCAGCGAGATGTGCTAGATGGGATGTTCACTTTCTATGATTCAACTAGGGCAATGCTAAACGTATATCAGGTCGCCAGTGTCACATTTGACCTTCTGTTGCTGTTAGTATTGGGGTCATATTTAATTTTGCTCTTCAGTTTCTTGGTCATCACAACTAGGGGCCTTGATGATCTAATCAGCTTATTTCGACGGCCTCCCTCACGAAAAGTGAAGACTGCATAG 1704 0.4466 MIMAPRKARERQLLVESMYSIIALLFLLVTCVELCDAASVVDVYRLIQYDMSGAPFGSRLASLNHHAGSLHFSPHTDLSRTVLVIPLRELNITFVKEYIVEKKPLGGLLFLLPKMFSLENKGGMRTDHQDDGKEQLKSVLAELEQILVHNNLPYPVYFAYEDDNIHAVLADIKKNDATGQPATATNGGYKFVVSAPEPKKVASPTITNIQGWLAGKKTDDDASQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGHYNLLFGLTSGGPYNYNGTRKWLRSFDQRMRESIDYAICLNSIGSWEKDLWIHVSKPPENVYIKQIFEDFSSVAEELGFTVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTAPDLLERTGGLVDSRLFVNETAVVRSVKLIAESLARHIYRHQGKNIQVFADNSSLAVNPSYIRSWLNVLSQTPRVAPFLPKDDPFVAALKKELEDHTDQVDLQRDVLDGMFTFYDSTRAMLNVYQVASVTFDLLLLLVLGSYLILLFSFLVITTRGLDDLISLFRRPPSRKVKTA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0482 567 ProSitePatterns EF-hand calcium-binding domain. 248 260 IPR018247 -
Alju10g0482 567 SUPERFAMILY Zn-dependent exopeptidases 188 390 - -
Alju10g0482 567 Gene3D Zn peptidases 133 428 - -
Alju10g0482 567 PANTHER NICALIN 11 567 IPR016574 GO:0009966|GO:0016020
Alju10g0482 567 PIRSF Nicalin 3 562 IPR016574 GO:0009966|GO:0016020
Alju10g0482 567 CDD M28_nicalin_like 140 431 - -
Alju10g0482 567 Coils Coil 478 498 - -
Alju10g0482 567 Pfam Nicastrin 228 365 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0482 7 565 EF-hand Containing Proteins AT3G44330 73.166 0.0 849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0482 10 3865482 3877150 Alju10g0482 10 3865482 3877150 ECH