Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0476 ATGACTCGGATTTTGGTTCCGCGGGGTTCGTCTAGCAATTCTTCATCAAACCCTAGTCGTTCTTCTTCAACTCGGGTAGAGCCACTCGCAACAGTTCCCCCGGCTCCTTCGACTGTGAAAGATGAGGACAGTGGACAGGAGGTATCAAACCTAGTTGCTGACAACGAGCTTTTGGATTCTTCTGGGAAGAACGACGAACTTTTGGTAGATAATCTTCGTTGTGAGCAGAATGACGTTACAAGTGATGAAATAGCTGACGTTGAGAAAGCTGGTAAAGAGGATGTAGCAGGTAGGCGAGAATATGACAACAGATTGTGTGGATTGAAAATTTCAGAAAGACTTGCATCAGGAAATGAGGGTTCAAGCTGTGATTCTTTGCGCAGTGCTAACGTTACTCCAAATCCACCACCTCCTCCTGTTCCTCCTCCAAAACTGTCAGCTTCTAACTTGAATTCAAAGAAAAATGTGTCATCAAATTCAAATGCCGTCCAAATAGGACCATCTCGAAGAGCATCTGCGTGGCCTGTTGTTTCAGCCAGGACTTCACCTGCTGGGTCTCGACCTTCTTCCCCTAGGTCTCTTAATGAGAATGAGGGTTACAATAGCGCTGACGAACAGAAAGCATGCTTTCCATCCTCTTACGATGATTTAGAGAGGGAGCGGCAATTTGAAATTGATATCAGAAGGGCAAAAGGTTATGAAGTAAAAAGAATGATGGAGGATGGAAACTGTCTTTTTCGTGCAGTTGCGGACCAGGTGTATGGGGACTCTGAATTATATGATTTGGTCCGACAGATGTGCATAGATTATATGGAGCGGGAAAGAGACCACTTTTCTCAATTTATTACTGAAGGCTTCACATCTTATTGTAAGAGGAAGAGAAGAGACAAGGTCTATGGAAACAATGTTGAGATCCAATCCATGTGTGAGATGTATAATCGTCCCATTCATATATACTCCTATTCTATAGAACCTATCAACATCTTTCATGGAAGCTATGACACTGATACACCGCCCATACGACTGAGTTATCATCATGGGAATCATTACAATTCGCTTATTGACCCACGACGCTTGACAGTTGGTGCAGGACTTGGATTTAGCTGCCTTCGTGGGACAAATGTTGACAAAGATCAAGTCAAGGCTGCAATTAAAGCTCAACAGGACCAACAGATTGATAATGCACTTTTAGCGGAGGCCCGGTTTTACTCTGATCTCGAGCTTACAGAAAAGGAGATTGAGCACATGGTGATAGAAGCTTCTCGGGCTGAATATCTGGCTGATGTCACATTTAAGCAGCAACCTTCCCATAGAGAATCCTCAACTTCAAACGCTGAGCCTTCATCTTCTGGAGCAACAGGATCATCGGGTGGAGAAGGCAAGACGGGGATTGGGAAAGAGCGAGATTCAAATCTGAGCAATGGCATGCAGATGGTGCTATCCATGGGATTCAGCTACCTGCAGGCGATAGAGGCTTATAGCATATTTGGGGATGATGTGGATTCTATGGTTTGTTACCTCTTGGAAACCAGCAGTAGCAGCAGACGAAAAGGCAAGGCCCCTGAGTGA 1569 0.4474 MTRILVPRGSSSNSSSNPSRSSSTRVEPLATVPPAPSTVKDEDSGQEVSNLVADNELLDSSGKNDELLVDNLRCEQNDVTSDEIADVEKAGKEDVAGRREYDNRLCGLKISERLASGNEGSSCDSLRSANVTPNPPPPPVPPPKLSASNLNSKKNVSSNSNAVQIGPSRRASAWPVVSARTSPAGSRPSSPRSLNENEGYNSADEQKACFPSSYDDLERERQFEIDIRRAKGYEVKRMMEDGNCLFRAVADQVYGDSELYDLVRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQSMCEMYNRPIHIYSYSIEPINIFHGSYDTDTPPIRLSYHHGNHYNSLIDPRRLTVGAGLGFSCLRGTNVDKDQVKAAIKAQQDQQIDNALLAEARFYSDLELTEKEIEHMVIEASRAEYLADVTFKQQPSHRESSTSNAEPSSSGATGSSGGEGKTGIGKERDSNLSNGMQMVLSMGFSYLQAIEAYSIFGDDVDSMVCYLLETSSSSRRKGKAPE 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0476 522 CDD OTU_plant_OTU6-like 229 355 - -
Alju10g0476 522 MobiDBLite consensus disorder prediction 146 167 - -
Alju10g0476 522 SUPERFAMILY Cysteine proteinases 221 356 IPR038765 -
Alju10g0476 522 MobiDBLite consensus disorder prediction 433 457 - -
Alju10g0476 522 MobiDBLite consensus disorder prediction 182 206 - -
Alju10g0476 522 Gene3D - 215 366 - -
Alju10g0476 522 PANTHER OTU DOMAIN CONTAINING PROTEIN 111 364 - -
Alju10g0476 522 MobiDBLite consensus disorder prediction 116 130 - -
Alju10g0476 522 ProSiteProfiles OTU domain profile. 233 356 IPR003323 -
Alju10g0476 522 MobiDBLite consensus disorder prediction 1 63 - -
Alju10g0476 522 MobiDBLite consensus disorder prediction 432 470 - -
Alju10g0476 522 MobiDBLite consensus disorder prediction 116 206 - -
Alju10g0476 522 MobiDBLite consensus disorder prediction 42 57 - -
Alju10g0476 522 MobiDBLite consensus disorder prediction 131 145 - -
Alju10g0476 522 Pfam OTU-like cysteine protease 241 350 IPR003323 -
Alju10g0476 522 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 467 510 IPR015940 -
Alju10g0476 522 MobiDBLite consensus disorder prediction 1 28 - -
Alju10g0476 522 FunFam OTU domain-containing protein 5 214 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0476 Alju-ChrAlju10 3838401 3841889 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0476 10 3838401 3841889 Alju10g0476 10 3838401 3841889 ECH