Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0459 ATGGAGATCGGAAGGCCGACTAACGTGCGCCATGTAGCGCACGTCACATTTGATAGATTCAATGGTTTCTTGGGCTTGCCTGACGAATTCGAACTTGAAGTGCCCAGAAGGCCTCCCAGTGCAAGTGCAACTGTCTTTGGAGTTTCAACAGAATCCATGCAGCTATCGTTTGACTCCAGAGGAAACAGTGTGCCAACCATCCTGTTATTAATGCAAAGACGCCTGTATAGTGAAGGAGGTTTGCAGGCAGAGGGCATATTCAGAATTAATGCAGAAAATAGTCAAGAGGAATATGTTAGGGAGCAATTAAATAGGGGAGTTGTCCCTGAAGGCATTGATGTCCATTGCTTAGCAGGCCTTATCAAGGCTTGGTTTAGGGAACTGCCAATAGGCATTCTGGATTCCTTATCAGCTGAGCAGGTAATGAAAAGCCAAACTGAAGAAGAATGTGCAGAACTAGCAAGGAACCTACCCCCCACTGAAGCTTCCCTCTTGGACTGGGCAATCAATCTCATGGCTGACGTTGTCCAACATGAACATCTCAATAAGATGAATGCACGCAACATTGCAATGGTTTTTGCCCCAAACATGACTCAGATGGCAGACCCTTTGACTGCATTGATGTATGCGGTTCAAGTGATGAACTTCTTGAAGACACTGATACTAAGGACACTGAGGGAAAGAAAGGATTCTATAGTAGAATCTTCACCTGGACCTGGCTTTTATTTAGAGCCACCTGATGATAATAATAGTCACCAAAGCCCTATAATACAGTTATGCCAGCCAGATTCTGCTAAAGATAATGAAGAGGCTCAGGCCCTTAAAACTGAAAAAACTGTCTCAGAAAGTAACACTGCCCCTGATTCCCTCCAAGAGACTACTAACTTAACTGTAAGAGAATCTGGGAGTTTGGGAACCTCTTCTGAAAACCCAATATGTAATGAGGATTTGTATTGTGAGTATCCACCTAAAGGAAATGTTGCGAAGAGCAAGACAGGCCAATCAACCAATTCAAATTCAAGAAAGGGATCGAAGAAAAGCAGAGACCAGCAACATTCAAACCATCAAGGAACAATGACTGTTGAGAAAACTAAGGGCAATGGCAAAATGAGTCTCATAAATTCAAGATCTGAGAAGGCAGAACCATGGAGGTGA 1155 0.4355 MEIGRPTNVRHVAHVTFDRFNGFLGLPDEFELEVPRRPPSASATVFGVSTESMQLSFDSRGNSVPTILLLMQRRLYSEGGLQAEGIFRINAENSQEEYVREQLNRGVVPEGIDVHCLAGLIKAWFRELPIGILDSLSAEQVMKSQTEEECAELARNLPPTEASLLDWAINLMADVVQHEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLRERKDSIVESSPGPGFYLEPPDDNNSHQSPIIQLCQPDSAKDNEEAQALKTEKTVSESNTAPDSLQETTNLTVRESGSLGTSSENPICNEDLYCEYPPKGNVAKSKTGQSTNSNSRKGSKKSRDQQHSNHQGTMTVEKTKGNGKMSLINSRSEKAEPWR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0459 384 SMART PBD_5 3 37 IPR000095 -
Alju10g0459 384 Gene3D CRIB domain 1 34 IPR036936 -
Alju10g0459 384 CDD RhoGAP 65 221 - -
Alju10g0459 384 SUPERFAMILY GTPase activation domain, GAP 43 222 IPR008936 -
Alju10g0459 384 PANTHER MKIAA1688 PROTEIN 1 350 IPR044785 GO:0005096
Alju10g0459 384 SMART RhoGAP_3 62 225 IPR000198 GO:0007165
Alju10g0459 384 FunFam Rho GTPase-activating protein 5 33 226 - -
Alju10g0459 384 CDD CRIB 1 41 - -
Alju10g0459 384 MobiDBLite consensus disorder prediction 277 313 - -
Alju10g0459 384 Pfam RhoGAP domain 65 199 IPR000198 GO:0007165
Alju10g0459 384 ProSiteProfiles Rho GTPase-activating proteins domain profile. 48 233 IPR000198 GO:0007165
Alju10g0459 384 ProSiteProfiles CRIB domain profile. 3 16 IPR000095 -
Alju10g0459 384 MobiDBLite consensus disorder prediction 233 255 - -
Alju10g0459 384 MobiDBLite consensus disorder prediction 353 374 - -
Alju10g0459 384 Pfam P21-Rho-binding domain 2 29 IPR000095 -
Alju10g0459 384 Gene3D Rho GTPase activation protein 36 232 IPR008936 -
Alju10g0459 384 MobiDBLite consensus disorder prediction 276 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0459 Alju-ChrAlju10 3694308 3698100 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0331 02 2552870 2558612 Alju10g0459 10 3694308 3698100 CCT
Alju10g0459 10 3694308 3698100 Alju10g0459 10 3694308 3698100 ECH