Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0382 ATGGCTCCAAAGCGTGCTAAGAACATCGTGGTCAAATCCACCAGAAAAGTAGTTGTGCAAGAAAGCACAGTTCAAGTCTCTGTCCTTAAAAGGTCAAGGAGATTAAACAAAGACGCCGAATCAGAAGAAGAAGCAAACACTTTAACCAAGGACAATGTGAGAACCATTCCTGTCCAAGAAGCAACAACTCCTCAACAGAAAACAGAGCAAGAAAAGCCAATGAAGGAAGGAACTAAAGGGAGGAAAAGGAAGAGAAAGAAGCTGGGAGAAGTTGGAGAAGGGTACAGGAGGTATGTGTACAGAGTACTGAAGCAAGTTCACCCAGAAATGGGGATTTCGTTTCAGGCCATGACCATTCTGAACAATCTCATGACTGATATGTTTGAGAGGCTCGCCGATGAAGCTACCAGGCTCAAGAATTACACAGGTCACGCCACATTGTCTTCCAGGGAGATCCAAGGGGCTGTGAAGCTGCTTCTTCCTGGAGAGCTTGGCAAGCATGCCATTGCTGAGGGTGCCAAAGCTGTCTCCAATTATATGTCCCACGATGCTCGTCACTAG 561 0.4635 MAPKRAKNIVVKSTRKVVVQESTVQVSVLKRSRRLNKDAESEEEANTLTKDNVRTIPVQEATTPQQKTEQEKPMKEGTKGRKRKRKKLGEVGEGYRRYVYRVLKQVHPEMGISFQAMTILNNLMTDMFERLADEATRLKNYTGHATLSSREIQGAVKLLLPGELGKHAIAEGAKAVSNYMSHDARH 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0382 186 Gene3D Histone, subunit A 53 182 IPR009072 GO:0046982
Alju10g0382 186 MobiDBLite consensus disorder prediction 50 68 - -
Alju10g0382 186 MobiDBLite consensus disorder prediction 33 49 - -
Alju10g0382 186 Pfam Core histone H2A/H2B/H3/H4 42 158 IPR007125 GO:0003677
Alju10g0382 186 MobiDBLite consensus disorder prediction 33 88 - -
Alju10g0382 186 FunFam Histone H2B 59 182 - -
Alju10g0382 186 PRINTS Histone H2B signature 95 113 IPR000558 GO:0000786|GO:0003677|GO:0030527
Alju10g0382 186 PRINTS Histone H2B signature 166 179 IPR000558 GO:0000786|GO:0003677|GO:0030527
Alju10g0382 186 PRINTS Histone H2B signature 114 134 IPR000558 GO:0000786|GO:0003677|GO:0030527
Alju10g0382 186 PRINTS Histone H2B signature 153 166 IPR000558 GO:0000786|GO:0003677|GO:0030527
Alju10g0382 186 PRINTS Histone H2B signature 136 153 IPR000558 GO:0000786|GO:0003677|GO:0030527
Alju10g0382 186 SUPERFAMILY Histone-fold 70 181 IPR009072 GO:0046982
Alju10g0382 186 SMART h2b3 81 181 IPR000558 GO:0000786|GO:0003677|GO:0030527
Alju10g0382 186 PANTHER HISTONE H2B 65 181 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0382 Alju-ChrAlju10 3045595 3046155 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0382 10 3045595 3046155 Alju10g0382 10 3045595 3046155 ECH