Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0340 ATGAGCAATTCGTACCCTGAAGATTACGAACAAGTAATTGTTGAAGGATTTGAAGTTCCGAAGTCTCCCGATTCCAGTTATAGCAACGAGTATCCTGGAAATGAAGATGACGCTCGTGATCCGCCCGCAATTCCTCCGCAGTTGCAGCATACGTTGCTCCATTATCCGGCTAGTAGAAGCAATTCTGAGACTCTTCCACTGCCTCGTAACGTAAATCTCAATCATCTTTATATTGAGAACAGAGAGGCTCCAAAATCTGTGGTGGCATTAGGAATTACTCATCGCTTCCTATCAAAATATGTTACTGTTGTGCTTTACAAACCAGTCCAAAGAGGCAGTAGTACAAGCATAAAGTATCTTTGGTATTATAAAGAGAAATGGGAAGGGGATAATATGGAATCACCTGCTGGAAAAATTGTCTTGGTTACATGGAATCCACCACAAAAAGGATGGTGCAAACTTAATGTAGACGACAAAAGGTCTGTGCATGCAGGGGCAGGGTGTGGGCGAGTCATAAGGGGAGAAAAAGGAGAATGGCTTAGAGGTTTTTCTATAAAACTGACTGAAATCGTTTGGGATGCAGCAGAAGCAAGAGCCATAGCTGAGGGATTGATATTATGCTGGGATATGGGATTTAGACTTGTTGGGGTTGAAAGTGATGCAAAGAAGGTAGTAGAAGCTATTAATCAATGCTCTAACATTCCTGGGATCCGACCTCAGCTGAGAATCATAAGAAATTTCTTGAGAAAGGATTGGCAAGTCCGCATAAACCATGTTTATCACGAAGGCAATTGTGTAGCGGATGCATTAGCAGATCTCAGCACGGAACTTTTTGTTCCAAAAACTGTGGATGCGGCCACCAAGCCTGGTCCAAGTGTTACTGAAGGAGGATAG 894 0.4295 MSNSYPEDYEQVIVEGFEVPKSPDSSYSNEYPGNEDDARDPPAIPPQLQHTLLHYPASRSNSETLPLPRNVNLNHLYIENREAPKSVVALGITHRFLSKYVTVVLYKPVQRGSSTSIKYLWYYKEKWEGDNMESPAGKIVLVTWNPPQKGWCKLNVDDKRSVHAGAGCGRVIRGEKGEWLRGFSIKLTEIVWDAAEARAIAEGLILCWDMGFRLVGVESDAKKVVEAINQCSNIPGIRPQLRIIRNFLRKDWQVRINHVYHEGNCVADALADLSTELFVPKTVDAATKPGPSVTEGG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0340 297 MobiDBLite consensus disorder prediction 16 44 - -
Alju10g0340 297 Gene3D - 150 276 IPR036397 GO:0003676
Alju10g0340 297 Gene3D - 13 109 - -
Alju10g0340 297 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 4 111 IPR043554 -
Alju10g0340 297 Pfam Reverse transcriptase-like 166 272 IPR002156 GO:0003676|GO:0004523
Alju10g0340 297 SUPERFAMILY AMPKBI-like 14 109 IPR037256 -
Alju10g0340 297 CDD RNase_H_like 154 271 IPR044730 -
Alju10g0340 297 SMART AMPKBI_2 20 109 IPR006828 GO:0005515
Alju10g0340 297 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 39 108 IPR006828 GO:0005515
Alju10g0340 297 SUPERFAMILY Ribonuclease H-like 166 276 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0340 Alju-ChrAlju10 2723904 2725877 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0340 10 2723904 2725877 Alju10g0340 10 2723904 2725877 ECH