Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0247 ATGGTTAGAGTGTCGGCCGGGCCAAACGGAACGGCTCTGAACTTCAGGCAATTAAATGGTCCCATCACCCATGCCCCGCGAAACAAAACAGACTCTGAAAATACTGTTCCGGAACTCTGTCAAGTGAGAACCCTGAAGGGGCCGAAGCTGTTAGCTCGAATGGCGGCCTCTTTGGCGGCATCACGATTATCCCATTTCGCCTATCATGCTAGACACCAATCTACGCCGTCCGAAATCCCGCCTCTAACCACCTTCAAACCGTATGATTCTCATCCGAAACGCTACCGGAGCCTTTCCACTCGCGCTTTACTTCAGGGAGAGAACGAACTCAGCAAGAACCCCCAAGCTCTAGATTTACCAAGCGCCGATGACTTCCCAAGCGACGTCGTATCCAAAGACATGCTCGCCCTTCCGCGGCCATTGTCTTCTGCTCAGCTCTCTGGTTCAGTTTCTGATGGATCTCGCCTTCGTGTGGCATACCAGGGAGTTCGAGGCGCTTACAGCGAGTCAGCCGCACAGAAGGCCTACCCAAATTGTGAGGCAGTGCCTTGTGACGAATTTGACACCGCATTTGAAGCTGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTACCGATTGAGAATTCTTTAGGAGGGAGCATTCACAGAAATTATGACCTATTACTTCGACACAGGTTGCATATAGTGGGTGAAGTAAAATATGCAGTCCGCCATTGTCTGTTGGCCAATCATGGTGTTAAACTTGAGGATTTGAAGCGGGTACTTAGTCATCCACAGGCTCTTGCTCAGTGTGAGGACACGTTGACAAGTTTGGGATTGGTCAGAGAAGAAGTAGATGACACAGCTGGTGCTGCAAAGCATGTTGCTGTCCGCCAACTACAAGATGCAGGAGCAGTTGCTAGTTCTGCTGCTGCTGAGATCTATGACTTGAATATACTTGCTCATGATATTCAGGATGATAGTGATAATATCACTCGGTTTTTAATGTTAGCACGGGAACCAATTATTCCAGGCACAGATAAGCTATTTAAGACAAGCATAGTTTTTTCTTTAGAGGAGGGTCCTGGGGTACTTTTCAAGGCGCTTGCTGTTTTTGCTCTGCGACAAATCAACCTCACTAAGATAGAAAGTCGGCCATTGAGGAACCAACCTTTACGAGCATCATCTGACGATAGCACCAATATGTACTTTGATTATCTTTTCTATGTGGATTTTGAAGCATCAATGGCTGATCAGAATGCACAAAATGCCCTAAGGCATCTAAAGGAGTTTGCTACATTCCTGCGAGTGCTCGGGAGTTATCCAGTGGACACAAGTATGGCATAA 1326 0.4751 MVRVSAGPNGTALNFRQLNGPITHAPRNKTDSENTVPELCQVRTLKGPKLLARMAASLAASRLSHFAYHARHQSTPSEIPPLTTFKPYDSHPKRYRSLSTRALLQGENELSKNPQALDLPSADDFPSDVVSKDMLALPRPLSSAQLSGSVSDGSRLRVAYQGVRGAYSESAAQKAYPNCEAVPCDEFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKYAVRHCLLANHGVKLEDLKRVLSHPQALAQCEDTLTSLGLVREEVDDTAGAAKHVAVRQLQDAGAVASSAAAEIYDLNILAHDIQDDSDNITRFLMLAREPIIPGTDKLFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRNQPLRASSDDSTNMYFDYLFYVDFEASMADQNAQNALRHLKEFATFLRVLGSYPVDTSMA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0247 441 CDD ACT_CM-PDT 344 435 - -
Alju10g0247 441 FunFam Arogenate dehydratase 339 438 - -
Alju10g0247 441 Gene3D - 152 240 - -
Alju10g0247 441 Gene3D - 241 320 - -
Alju10g0247 441 FunFam Arogenate dehydratase 152 239 - -
Alju10g0247 441 SUPERFAMILY ACT-like 327 436 IPR045865 -
Alju10g0247 441 ProSitePatterns Prephenate dehydratase signature 1. 308 330 IPR018528 GO:0004664|GO:0009094
Alju10g0247 441 FunFam Arogenate dehydratase 240 320 - -
Alju10g0247 441 SUPERFAMILY Periplasmic binding protein-like II 157 338 - -
Alju10g0247 441 CDD PBP2_Ct-PDT_like 157 334 - -
Alju10g0247 441 Gene3D - 339 438 - -
Alju10g0247 441 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 91 439 - -
Alju10g0247 441 ProSitePatterns Prephenate dehydratase signature 2. 372 379 IPR018528 GO:0004664|GO:0009094
Alju10g0247 441 MobiDBLite consensus disorder prediction 1 33 - -
Alju10g0247 441 MobiDBLite consensus disorder prediction 10 33 - -
Alju10g0247 441 ProSiteProfiles Prephenate dehydratase domain profile. 157 332 IPR001086 GO:0004664|GO:0009094
Alju10g0247 441 Pfam Prephenate dehydratase 158 334 IPR001086 GO:0004664|GO:0009094
Alju10g0247 441 ProSiteProfiles ACT domain profile. 346 435 IPR002912 -
Alju10g0247 441 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0247 Alju-ChrAlju10 1928093 1935866 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0247 10 1928093 1935866 Alju10g0247 10 1928093 1935866 ECH