Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0219 ATGTCGGGTCTACTTAATTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGACAGTGCTGGGAGGTCATTTGCCACATCATTCTCCGGCCAGTCTGGTGCTGCCTCCCCAGTTTTCCATCATAGTGGTGCTATCCAGGGATTGCACAACATCCATGGAAGCTTTAATGTTCCCAACATGCCAGGTACACTTGCATCAAGAAATTCAACGATAAATAGCATCCCATCTGGAGGTGTTCAACAACCTACTGGAAGCTTTTCTAGTGGAAGATATGCATCAAATAATCTTCCTGTTGCTTTGTCCCAGCTAACTCTTGGAAGCTCTCATGGACATTCAGGAGTAGCAAACAGAGGAGGTATAAGTGTTGTAGGAAATCCTGGATTTAGTAGTAGCACAAATGGAGTGGGCGGTTCTATTCCTGGGATTCTTCCTACATCTGCTGCAATTGGTAACAGAAATGCTGTTCCAGGACTGGGTGTATCCCCAATTTTGGGAAATGCAGGTTCTCGAATTACAAGTTCTATGGGGAACATGGTTGGTGGAGGGAACATTGGGAGGAGCATTAGCTCTGCTGGAGGATTGTCTGTGTCTGGTCTTGCTTCTCGTCTAAGTTTAAGTGCAAACAGTGGATCTGGTGGTTTAAGTGTGCAAGGACAGAATCGGTTGCTGAGTGGCGTGCTTCCACAAGGATCACCCCAAGTTATTTCAGTGCTAGGAAATTCTTATCCTAGTGCCGGAGGTCCCCTTGCCCAAAGCCATGTTCAGGCAGTAAATAATTTGAACTCAATGGGGATGTTGAATGATATGAATTCAAATGACAGCTCACCTTTTGACATCAATGACTTTCCTCAATTGACGAGTCGACCCAATTCTGCTGGAGGGCCCCAAGGACAGTTGGGTTCTTTGCGAAAGCAGGGTCTTGGAGTTAGTCCCATTGTCCAGCAAAACCAAGAATTTAGCATTCAAAATGAAGATTTCCCAGCTTTACCAGGATTTAAAGGTGGCAATGCAGATTATGCTATGGATATGCACCAGAAAGAACAACTTCATGAGAATGCTGTGTCCATGATGCAATCTCAACATTTTCCTATGGGAAGGTCTTCTGGTTTCAGCTTAGGGGGGACATATTCATCACATCGATCCCAGCAACAACAGCATGCTCCATCTGTCAGTAGTGTTGGTTCCTCTTTTTCATCTGCAAACAATCAGGAACTTCTCCATCTACATGGGCCAGATGTATTTCCAGCATCGCATTCAACCTATAATTCCCAGGTCAGTGGGCCTTCTGGCATTGGATTAAGGCCTCTGAATTCTTCAAATACTGTTTCTGGTATGGGATCATATGACCAGCTTATCCAGCAATACCAACAGCACCAAAACCAGTCCCAGTCGCAGTTTCGTCTTCAGCAAATGTCAACTGCAAATCAGTCTTTTAGAGATCAAGGCATGAAATCCTTGCAAACTTCCCAATCAACACCAGACCCATTTGGTTTGCTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCTGATTTGACATCTCTTGCACTTGGAATTGATCTTACAACACTTGGGTTAAATTTAAATTCATCAGAAAATCTCCACAAGAGTTTTGGATCTCCATGGTCTGATGAACCGGCTAAGGGCGATCCAGATTTCACAGTACCACAATGTTATTATGCTAAACAGCCGCCTGCCCTGCATCAAGGCTATTTTTCAAAGTTTACAGTGGAAACGTTGTTTTACGTATTTTACAGTATGCCCAAAGATGAAGCTCAATTATATGCCGCAAATGAGCTTTACAATAGGGGCTGGTTTTATCACAAAGAACATCATTTGTGGTTTATCAGAGTGCCTAACATGGAGCCACTTGTTAAAACAAACACGTATGAGAGGGGATCTTATCACTGCTTCGATCCAAACACATTCGAAACAGTTCGTAAGGATAATTTTGTCGTTCATTATGAGTTGTTGGAAAAACCTACCCCTGCCCCAGCATTGAGGGGTAAGGTAAACTTGTGA 2022 0.4362 MSGLLNSSLNGSASNLPDSAGRSFATSFSGQSGAASPVFHHSGAIQGLHNIHGSFNVPNMPGTLASRNSTINSIPSGGVQQPTGSFSSGRYASNNLPVALSQLTLGSSHGHSGVANRGGISVVGNPGFSSSTNGVGGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGSRITSSMGNMVGGGNIGRSISSAGGLSVSGLASRLSLSANSGSGGLSVQGQNRLLSGVLPQGSPQVISVLGNSYPSAGGPLAQSHVQAVNNLNSMGMLNDMNSNDSSPFDINDFPQLTSRPNSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHENAVSMMQSQHFPMGRSSGFSLGGTYSSHRSQQQQHAPSVSSVGSSFSSANNQELLHLHGPDVFPASHSTYNSQVSGPSGIGLRPLNSSNTVSGMGSYDQLIQQYQQHQNQSQSQFRLQQMSTANQSFRDQGMKSLQTSQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKSFGSPWSDEPAKGDPDFTVPQCYYAKQPPALHQGYFSKFTVETLFYVFYSMPKDEAQLYAANELYNRGWFYHKEHHLWFIRVPNMEPLVKTNTYERGSYHCFDPNTFETVRKDNFVVHYELLEKPTPAPALRGKVNL 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0219 673 PANTHER CCR4 NOT-RELATED 45 660 IPR040168 GO:0030015
Alju10g0219 673 MobiDBLite consensus disorder prediction 266 303 - -
Alju10g0219 673 MobiDBLite consensus disorder prediction 266 298 - -
Alju10g0219 673 MobiDBLite consensus disorder prediction 66 90 - -
Alju10g0219 673 Gene3D - 486 669 IPR038635 -
Alju10g0219 673 MobiDBLite consensus disorder prediction 368 398 - -
Alju10g0219 673 FunFam probable NOT transcription complex subunit VIP2 isoform X1 486 667 - -
Alju10g0219 673 Pfam NOT2 / NOT3 / NOT5 family 536 658 IPR007282 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0219 Alju-ChrAlju10 1645657 1650207 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0219 10 1645657 1650207 Alju10g0219 10 1645657 1650207 ECH