LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju10g0218	ATGGATGATGAACTGCTTGAGTTGCAAAGACAATTCGAGTTCGCTCAGCAGGCAAAGTCGAATGTTCGATTATCGGAGAGAAACGTTGTTGAATTGGTTCAGAAATTGCAGGAGCTTCACATCATTGATTTCGACCTTCTTCACACTGTCTCTGGCAAAGAGTACATCACTCCCGAGCAACTGAGGAATGAGATGGTGGCTGAAATTAAGAAGCTAGGGCGTGTTTCTCTGATTGATCTCGCTGATTCTACTGGAGTCGATTTATATCATGTTGAGAAGCAGGCTCAACAAGTTATAAAAGATCATCCAGAGATGATGCTGATTCAAGGGGAAATCATGTCAGCATCTTACTGGGATTCCATAGCTGAAGAAATTAACGAGAGGCTTCAGGAATGTAGTCAGATTGCACTTACAGAACTTGCTGCACAATTAAATGTTGGTCTAGAATTGGTTGCCTCCATGTTGGAGCCCCGTCTTGGAACTATGGTGAAGGGCAGGCTTGAAGGTGGGCAGTTGTATACTCCTGCATATGTAGCTCGTGTTGGTGCCATGGTTCGAGGTGCTTCCAGAGGCATCACTGTTCCGACAAATTTGTCATTGTTATGGAGCTTGTTACAACAATTACTGCAAGAAATGGATGGAATCAGCAGTGTCGTTGCTGAAGGAGCTTTCTTCCAGTCACTTTTTAATGGGCTTGTGAAGGAAAGTGAGATTCTAGGATCACTTCGTGCTGGAATACATTGGACACCTGCGGTCTTTGCCATTGCTCAAAAGGAATCGGTGGATTCATTCTTCTCACAGAATTCTTTTATTAGCTATGACGTTCTACAGAAACTTGGAATTCCCCAGCCCATTCAATTTTTGCAGTCCAGATATCCTGAAGGTATACCTCTAGATACAATGTTTGTCCACCCGTCAATGATGGAAATGCTGGATGCTGCTACTGAGGATGCCCTTGAGCGTGGTAGTTGGAGTGATGCTCTGTCCTTATTGCCTTCATCCTTCACTCCTCAAGATGCATCTAAAATGTTGACCTTCTGCCAATCTGTTCAATCTGCTCTTAAGTCTAACCAAGCACACATTTTTGGGGATTTTTATGTTTTGAGCAACAGCTTTATGAAGGGCGTCTGTGAGCACTTGGTGAAAGAAATGGAAACACTAGGTGTTTCAGGGTCTTCTGGCATTAAAATGTTTAGTGATTCACAAGTAGCGAATGAAGGAAAAATTGGGCAGGACTTAATTCGATCAAATGAGTCAAATGAAACTGCAACTGATGGCAGTGCCATTAAACATGTTGATAGAGGATCAAAGAAGAAAAAGGGAAAGGCTACTGGGAACACGGCGGCAAATGTGTCTGACAGTGCTGCAGATATTCCGGAACAGACTTCCACAAAATCTAAGAGAAGCCAGAGAAGGGGCAAGGAAACCTCTTCCTCACAAATGTCAGATTCAAAAATTGGTTCTAGGAAAGAATCACTTAAAACGAAGGAGGATAGCCTCAGTAGTCCTTCAGATGAGTGGATTATGCAGAAGATTATGACTTTGGTTCCTGATTTTGAAGAACAATGCATGGATGATCCTGAAACAATTCTGAGGCCTTTGGCTAATCATTTAAGGCCTACGATAATGGCTTCTTGGATGGAGAAGAAGAAAGCATTGTTTACAGAAAATGCTGAAAGAATGAAATCTTTGCTTGATAATTTGCAAAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTTTATGAAAAAGCTTTGGAATTATTTGAAGATGACCAATCAACCTCCGTTGTTTTGCATAGGCATTTATTGAGAACAGTAGCTGCCCCTATGGTGGATATACTTCTTCGTACGTTGGATGAGCACAACAAGTTAAAGAACGGGCTTGAAGTGGAGGAAGCTTCAAATTCAGAACTGCTCACACTTAGTCCTGGAGACAGAGCTGCTATCTCGAAGAGTTTACCGGGAGCGCTTGGTAAGAAAGCTCTTGGTGTTGTTGAAGCATTGGAAGGAAAGCGGGTGGAAACGTTTATGGATGCTTTTAGAGAGGTAGCAGAAGAGAGTGGGTTGTCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTTTACATTCATATCGTAAGGAACTGACATCTCAAATTTCTATTGAGACTGATCCAATATCACTTCTGGCAAAAGTTGTGTCTTTACTTTACGTGCAGGTTTACCACAAAGCTCTTCAAGCCCCTGGAAGGGCCATTTCTGTTGCCATCTCCCAACTGAAGGACAAGTTAGATGAGTCGACATTCAAGATTTTGACCGATTATCAGAGCGCTACGGTGACTCTTCTGGCACTATTAGCAGCTGCAACTGGCGATGAAGAGGATTGTTCTTCTGATAGAATATTGAGCAAACGGGAGCTTTTGGAGAGCCAAATGCCATCTTTGAAAAGCCTAGTCTTGAGCTCCTCGCAATTGTCATAG	2466	0.4238	MDDELLELQRQFEFAQQAKSNVRLSERNVVELVQKLQELHIIDFDLLHTVSGKEYITPEQLRNEMVAEIKKLGRVSLIDLADSTGVDLYHVEKQAQQVIKDHPEMMLIQGEIMSASYWDSIAEEINERLQECSQIALTELAAQLNVGLELVASMLEPRLGTMVKGRLEGGQLYTPAYVARVGAMVRGASRGITVPTNLSLLWSLLQQLLQEMDGISSVVAEGAFFQSLFNGLVKESEILGSLRAGIHWTPAVFAIAQKESVDSFFSQNSFISYDVLQKLGIPQPIQFLQSRYPEGIPLDTMFVHPSMMEMLDAATEDALERGSWSDALSLLPSSFTPQDASKMLTFCQSVQSALKSNQAHIFGDFYVLSNSFMKGVCEHLVKEMETLGVSGSSGIKMFSDSQVANEGKIGQDLIRSNESNETATDGSAIKHVDRGSKKKKGKATGNTAANVSDSAADIPEQTSTKSKRSQRRGKETSSSQMSDSKIGSRKESLKTKEDSLSSPSDEWIMQKIMTLVPDFEEQCMDDPETILRPLANHLRPTIMASWMEKKKALFTENAERMKSLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDILLRTLDEHNKLKNGLEVEEASNSELLTLSPGDRAAISKSLPGALGKKALGVVEALEGKRVETFMDAFREVAEESGLSLKKLDKKLERTLLHSYRKELTSQISIETDPISLLAKVVSLLYVQVYHKALQAPGRAISVAISQLKDKLDESTFKILTDYQSATVTLLALLAAATGDEEDCSSDRILSKRELLESQMPSLKSLVLSSSQLS	821

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju10g0218	821	MobiDBLite	consensus disorder prediction	411	426	-	-
	Alju10g0218	821	PANTHER	E3 UFM1-PROTEIN LIGASE 1	2	818	IPR018611	GO:0061666\|GO:0071569
	Alju10g0218	821	Coils	Coil	15	35	-	-
	Alju10g0218	821	MobiDBLite	consensus disorder prediction	443	463	-	-
	Alju10g0218	821	Coils	Coil	551	585	-	-
	Alju10g0218	821	MobiDBLite	consensus disorder prediction	487	501	-	-
	Alju10g0218	821	Pfam	E3 UFM1-protein ligase 1	4	288	IPR018611	GO:0061666\|GO:0071569
	Alju10g0218	821	MobiDBLite	consensus disorder prediction	411	504	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju10g0218	1	787	EF-hand Containing Proteins	AT3G46220	64.041	0.0	983

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju10g0218	10	1637999	1644697	Alju10g0218	10	1637999	1644697	ECH