Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0184 ATGGGATCGAAGCTCCCATTTGCACCACCCGGGCGCACAGGCAACAGGGGCGGACGAGCCCGCATTGAGGAAGCATCTCTATCTATAAATAATCGAAATGTCGGCTTTCGAATTTCCCTGTTTCTTAACAATCTAGGAGCTCCCTCTCCATTCCCTCTCGTTGGAGCTATTTCTATCTACCTCCGTCGGTTGATGGCATCGCAAGCTAGCCTTCTCCTTCAAAAGCAGCTAAAAGATCTTTGCAAAAACCCAGTCGACGGCTTCTCCGCGGGTTTAGTAGATGAAAACAACATATTCGAATGGAGTGTCACGATAATTGGACCTCCCGATACTCTTTATGAGGGGGGATTCTTCAATGCTATAATGAGTTTTCCATCAAATTACCCGAACAGCCCACCAACAGTGAAATTCACTTCAGAGATATGGCATCCAAATGTATATCCTGATGGACGGGTTTGCATATCAATTCTTCATCCTCCTGGTGAGGATCCAAATGGATATGAACTTGCGAGTGAGCGCTGGACACCTGTTCATACAGTAGAGAGTATAGTTTTGAGTATCATTTCTATGCTTTCCAGTCCCAATGATGAATCTCCAGCAAACGTTGAAGCTGCTAAGGAGTGGAGAGACACAAGAGACGATTTCAAGAAGAAGGTTAGCCGCTGTGTGAGGAAATCACAAGAAATGTTGTGA 693 0.4545 MGSKLPFAPPGRTGNRGGRARIEEASLSINNRNVGFRISLFLNNLGAPSPFPLVGAISIYLRRLMASQASLLLQKQLKDLCKNPVDGFSAGLVDENNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKEWRDTRDDFKKKVSRCVRKSQEML 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0184 230 SUPERFAMILY UBC-like 67 226 IPR016135 -
Alju10g0184 230 CDD UBCc 81 223 IPR000608 -
Alju10g0184 230 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 142 157 IPR023313 -
Alju10g0184 230 Gene3D Ubiquitin Conjugating Enzyme 65 230 IPR016135 -
Alju10g0184 230 FunFam ubiquitin-conjugating enzyme E2 7 66 230 - -
Alju10g0184 230 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 68 228 IPR000608 -
Alju10g0184 230 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 67 227 - -
Alju10g0184 230 SMART ubc_7 71 228 - -
Alju10g0184 230 Pfam Ubiquitin-conjugating enzyme 73 222 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0184 Alju-ChrAlju10 1359973 1363786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0184 75 195 Miscellaneous Gene Families AT3G17000 31.538 6.44e-13 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0115 02 976155 979695 Alju10g0184 10 1359973 1363786 CCT