Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0096 ATGTCTTCTTCAACCGCCTCTGCCGCCACTGGCGCCTCCCCTGACCACCTTCAAACGCCCACATTAGACCTCGAATCTTCCGCTCTCCTCCATTCCATTTCCGAGCATGGAGGCTATGCTTACGTCAGCATGGCCGCCCTCGGCGACTTTCGAGCTGCCGAAGCTGCCCGTGAGATGGCCTGGGAGCAGCTTCATTCGGGCCCTCCGCACTCTGTCCTCCCAGTTTGGCGCGACGCTTACTCTATGGCGTGCCTTCACGTCGCCAAGCACCATTACATCAACGGTGACTACAAGGAGGCTCTCAGGGCTTTGGATATGGGACTGATCATGGGGGGATCGCTTCTAAAGAAAGACTTGAGCTCTGCTGCTGACAAAGTATCGGAGGGGCTCAGGACCATTATGGCTTCCGAAGAAAGCCACGAAGGCTTTGGGAAGTCCGAGCATCGACTTGTCAGTCACCAACTTAACCAGGCAGAGGTGCACAAACTTCTACCCTTCAACTCCCTTTCTCATAAAATCCTGGAGAAGAGGTCTGCTCTGTCATTGGAAAGGTTCCTAGAAGATTATTACCGGTCTGGCTCCCCGGTTATCATCAGTGACTGTATAGTTCACTGGCCAGCCAAGACAAAATGGAATGACATAGATTATTTGAAAAAAGTTGCCGGTAATCGCACAATTCCAGTAGAGGTTGCAAAGGGCTATTTATGTGCGGAGGGGAAACAAGAGTTAATTACATTTTCAGAGTTTCTTCAGCGTATAGAGTCCCATGCCTGCTCTTCTGCCGGTCCTACATATCTTGCTCAGCATCCACTATTTGATCAGATAAATGGGCTTCGGAAAGATATTTGTATTCCTGACTACTGCTTTGCTGGTGGAGGGGAGCTAAGATCTCTCAATGCTTGGCTTGGTCCTGCGGGAATGGTAACACCATTACACCATGATCCACACCATAATATACTAGCTCAGGTTGTTGGGAAGAAATATGTAAGGCTCTACCCCCCATCTGTGTCTAAGGAACGTTACCCTTGCACTGAAACAATGCTTATGAATTCCAGCCAGATTGATCTAGATAACATAGATGAAAAGATGTTTCGTGGGGTGCAAGACTTGGAATTCGTAGACTGTATATTAGAGGAGGGTGAATTGCTATATATCCCGCAAAAATGGTGGCACTATGTCCGCTCTCTGACTACAAGTTTCTCCGTTAGCTTTTTGTGGAGTAAGGCCCAAGGTTCAGCTACATCCTGA 1248 0.4872 MSSSTASAATGASPDHLQTPTLDLESSALLHSISEHGGYAYVSMAALGDFRAAEAAREMAWEQLHSGPPHSVLPVWRDAYSMACLHVAKHHYINGDYKEALRALDMGLIMGGSLLKKDLSSAADKVSEGLRTIMASEESHEGFGKSEHRLVSHQLNQAEVHKLLPFNSLSHKILEKRSALSLERFLEDYYRSGSPVIISDCIVHWPAKTKWNDIDYLKKVAGNRTIPVEVAKGYLCAEGKQELITFSEFLQRIESHACSSAGPTYLAQHPLFDQINGLRKDICIPDYCFAGGGELRSLNAWLGPAGMVTPLHHDPHHNILAQVVGKKYVRLYPPSVSKERYPCTETMLMNSSQIDLDNIDEKMFRGVQDLEFVDCILEEGELLYIPQKWWHYVRSLTTSFSVSFLWSKAQGSATS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0096 415 ProSiteProfiles JmjC domain profile. 258 415 IPR003347 -
Alju10g0096 415 FunFam lysine-specific demethylase JMJ30 173 406 - -
Alju10g0096 415 SMART cupin_9 264 413 IPR003347 -
Alju10g0096 415 Pfam Cupin-like domain 184 407 IPR041667 -
Alju10g0096 415 Gene3D Cupin 173 407 - -
Alju10g0096 415 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 78 409 - -
Alju10g0096 415 SUPERFAMILY Clavaminate synthase-like 177 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0096 Alju-ChrAlju10 720911 724475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0096 168 393 Acyl Lipid Metabolism Gene Families AT3G45880 25.547 3.38e-13 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0096 10 720911 724475 Alju10g0096 10 720911 724475 ECH