Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2495 ATGGTTGCTATTTCAGTGGTTGAACAATACAAGTTCTACATACTTCCTCCTGTTGAAGCCTCAACATCTAGCCCGGTCAGAGTTGCATATCAGATGGACAATTCGAGGGATTATGATTCAGGTTCTCATCTAGCTGAGGAGCATGATGGATCCGATACTATAAAGGGAAGAGGTCCAGCAAGCGATGCAGATTTATGCTCCCCCTCTCCGTGCCGTAAGGTTTCTCAAGCTGAAGATTGTGCTTGTCATTCTACAGCGGAACAGTGTAGCAGATCTCAAAATATTGTGAAGCAGGAAAGACTCTCGGAGAAAAATTATGTATGTGTAGACCCAAGTTACCTGAAAACTCTTGGTCAAGTACATTCTGGGTGGATTTTTGGTGGAATAGCCGAACTTGTTGATAATTCAAGAGACGCCAAGGCAACAAAGATGGACATTCTTATCGACATGATAAAGTTGAAGAAATCTGGCAAGGATGAACCTATGCTTTCAGTTATTGATGATGGCCAAGGTATGGAATACAAAGACATTTTGAAAATGGTTTCCTTTGGGCACAAGCAAAGTAATAGTGATGATCCAGATCGCATTGGCAGATTTGGTGTTGGATTCAAGACTGGAGCGATGAGGCTAGGGAATGATGCTCTTGTTTTAACCCAGACTGCTAATTCCAGATGTATAGCTTTCCTTTCACAGTCTTTGAATGAAGGAAAAGAGAATGTTGAGATCCCTGTAGTTTGCTATCGCCGACAAGGACAGTGCATGGAAGTGGATACAAGTGTTCAGTCGGAAGCTGCAGCGAAGTACAATTTTAAAGCCATTAAGGAGTTTTCTCCATTTGATAAGTATCTTATCGGTGAAAAGGCTGCATTGTTTTCTGGTGGCACAGGAACACAAATTTACATATGGAACCTGGATAAATGGGGATCAAATTATTGTCTGCAATGGTGTGATGGATTATTAGGTAGCAGCTCTTTCCACCATGGTGACATTTTCATCCGATCCAGAAGGATCCGTTCTCGCCCTGGCCAAGTTAGTGTTAAGGTTCCATTGGATTATTCACTTCGATCTTATCTAGAAGTAATCTTTTCAGTTCCTCGGATGAAAATAAGTGTTCAGCATTCACTGGTTAGAAGTCGTCCTCTAGGAAATTTTCTTACTAAAACCGTCATTGAAAACGGTTGTGTCCTGGGAAAGCATGTTCACTTGACTCTGGGATTCAGTCAATTAGAATGGGAGCAGGCAAACTGCGGAATATTTTTGTATTGGCATGGTCGCTTAATTGAAGCTTACAAGAGAGTTGGTGGCATGATTCATACTGCAGATGTGGGCCGTGGTGTAATTGGTGTCATAGATGTGACTGATTTAATGGATGATGGGGATGGTCGTGTCTGGGTGCATAATAACAAGCAGGGATTCCAGGACTGTGAATCATATGCACTTCTAGAGCTGTGGCTTGGTAGAAAAGTAGATGGATACTTGGACAATAATTTTGATTCACTTAAATTGGACAATGATAATTGTGTCTACAAGCCTGATTGTGAATGGGTCCAATGTGACAAGTGCAGAAAGTGGAGAATTTTGCCTCTTGACTTTGACATCACATTATTACCTGCGCAATGGTTCTGTTATATGGAGCCCTTCAAAGGACTGTGTGCAGCTGCAGAGCAAAAAATGGAGCATGGCATTGTCAATGTTTCGACAAAGCGGTCTGGATATGATAGCGTGCTGGAAGATTCTCTTTGTAATGACAAAGTGAATCCTATGAATCTTTCCAAGGCTACAGCAGATGAAAGGTGGATCGACTGTGGAGATTTGAAGCCGCGGGGTTTCAAAAGATTGAAAAGGGGACCTCCTAAAGATAAGGTTAAATCTCCTTATACCAAACGTTTAACGAAATGA 1899 0.4181 MVAISVVEQYKFYILPPVEASTSSPVRVAYQMDNSRDYDSGSHLAEEHDGSDTIKGRGPASDADLCSPSPCRKVSQAEDCACHSTAEQCSRSQNIVKQERLSEKNYVCVDPSYLKTLGQVHSGWIFGGIAELVDNSRDAKATKMDILIDMIKLKKSGKDEPMLSVIDDGQGMEYKDILKMVSFGHKQSNSDDPDRIGRFGVGFKTGAMRLGNDALVLTQTANSRCIAFLSQSLNEGKENVEIPVVCYRRQGQCMEVDTSVQSEAAAKYNFKAIKEFSPFDKYLIGEKAALFSGGTGTQIYIWNLDKWGSNYCLQWCDGLLGSSSFHHGDIFIRSRRIRSRPGQVSVKVPLDYSLRSYLEVIFSVPRMKISVQHSLVRSRPLGNFLTKTVIENGCVLGKHVHLTLGFSQLEWEQANCGIFLYWHGRLIEAYKRVGGMIHTADVGRGVIGVIDVTDLMDDGDGRVWVHNNKQGFQDCESYALLELWLGRKVDGYLDNNFDSLKLDNDNCVYKPDCEWVQCDKCRKWRILPLDFDITLLPAQWFCYMEPFKGLCAAAEQKMEHGIVNVSTKRSGYDSVLEDSLCNDKVNPMNLSKATADERWIDCGDLKPRGFKRLKRGPPKDKVKSPYTKRLTK 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2495 632 Pfam CW-type Zinc Finger 514 556 IPR011124 GO:0008270
Alju09g2495 632 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 129 241 - -
Alju09g2495 632 MobiDBLite consensus disorder prediction 39 55 - -
Alju09g2495 632 Pfam Morc6 ribosomal protein S5 domain 2-like 352 492 IPR041006 -
Alju09g2495 632 ProSiteProfiles Zinc finger CW-type profile. 509 559 IPR011124 GO:0008270
Alju09g2495 632 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 125 288 IPR036890 -
Alju09g2495 632 MobiDBLite consensus disorder prediction 612 632 - -
Alju09g2495 632 Gene3D - 505 564 - -
Alju09g2495 632 Gene3D - 119 282 IPR036890 -
Alju09g2495 632 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 59 570 IPR045261 GO:0016887
Alju09g2495 632 MobiDBLite consensus disorder prediction 37 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2495 Alju-ChrAlju09 47764659 47772631 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2495 09 47764659 47772631 Alju09g2495 09 47764659 47772631 ECH