Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2467 ATGTTCCCACATATCCGGTTCCTCGGGCCTCTACCCACCACTTCCCAGCCCAGCCCACCCAACGCCTTCTTCTCCTTCCCCTTTCCTGGGCCTTCTCTTCTCCATCATGGACTTGCACTTTTATTTTGTTTTTGTTCAACGAATTTCAAGTCATTCAATATCAAGCTCCTATACTTACTAATTAGGCCCGAAGGAGGAACTACTTTACCCTATCCTATTCTGATTCCCATCGAAAGCAAAAGCCCCAGCAAAAACCGCAATCAACTGCTCTCTCCCCAAAGCACTACCGACTCTCTCTCTGTTTTCGGTTATCACAAAGCAATTGCGGCACTTTCCCCCCTCTCTCTCTCCCCGATCTGGAGTCGCTTCACTCATCTTCATCTCGCAATGTTCGTCAAGAAGCTGGTCGACAAAGCCTCCGTCAAGAAGCCTGGTGGGAATTCAGATGGGTTTAAAGCCAGCGATTTAGACGCACGTTTGGTTTTTCACTATGGGGTCCCATCCAACGGCGCCAAATTAGCTTATGACAATAATCAGAAGATTCTTGCTCTCTCTACAAAGGATGGCAGAATTAAACTATTTGGAAAACATAACACTCAAGCCATCCTCCAATCTCCTGAGCCAGTGCCCAGCAGGTTTCTACAGTTCATCCAGAATCAAGGCATCCTTATTAATGTCACTCTCAATAACCATATTGAGGTCTGGGACATTGACAAGAAGCAGTTGGCTGATGAATACGTCGTTAAAGAAGAAATTACTTCCCTTGCTGTCATTCAGCATAGCTTCTACATGTACATTGGAGATTCTGTTGGCAATATTTCGGTTTTCAGCTTGGATCAGGAACCCTGGCGGATAGTCCAGATGAAATACATCATCCCGCTATCAGCTTCTTATGGGAGTCCAACTGAAGTGTCAGATGATATTGCTGTGACACATCTATTGCTTCAACCAGCAGCTGAAAGCAAGAGGGTTCTCATAATTTTTAGAAACGGCCAAATAATATTATGGGATATTCAAGAAAGCAAATCTATCTTTAGAACTGGTGGAAACATATCACAACCATCCTATAATGAAGCTAAGAAAGCGACTTCTGCATGCTGGGCATGTCCTTTTGGAAGTAAAGTGGTTGTAGGGTACAGCAATGGAGAGCTTTTAATTTGGAATATCTCTTCTCAAAACGTTGGGAATGATTCAGCATCTGATTGTACCACTCAAAACACTCCTACGTTCAAGCTTAACCTAGGATATAAATCAGATAAAATTCCCGTTGACTCGGTTAAATGGATATATGCTGAAGGAAAGGCAAGTCGACTTTATGTCATGGGAGCTTCTGACACTGCATCTCCAAACTTAGTCCAGGTAGTGTTACTGAATGAGAAGACAGAGTCTCGCACAGTTAAGCTGGGCCTTCATTTGGCTGAATGTTGTATTGACATGGAGGTCTTATCAACTTCAAGTGAGCAAAGCAAGCAGAAACAGGATTCTTTCATTTTGCTTGCGAAATCAGGCCGCGTTTATGTGTACGATGATAGTTTGATCGAAAGGTATCTTCTACAATGCCAGTCTAAGTCCTCACCCTCACTGCCAAAGGAAGTGATGATTAAGTTGCCACTGTCAGATTCAAGCATCTCGGCAGCGAAGTTCATCTCAGACAATCCTAATCTCCGAAATGCCGATAATGAGGAATATGTTCAGCTGCTGAAAAACTACCCACCTCTTATTCCCATTGAAGGAAAACACAAAGACGCCCCTATTCTGAATTCTTCCAACTTCACCGGATTTTCAAAAGTGAAAAACTTGTACATAACTGGCCACAGTGACGGAGCCATAACTTTCTGGGATGCGTCGTGTCCCCTTTTCATCCCAATTTTGCAGTTGAAGCAACAGAGTGAACATGAGTTTTCTACAAGTGGCATACCCATAACAGCGTTATATTTCGATGCCAACACGCCCCTTCTTGTTTCCGGAGACCAGAGTGGAATGGTTCGCATCTTCAGATTCAAACCTGAACCTTATTCAAGCAACAGCTTCGTATCTCTTACGGGAGGCACAAAAAAAGCTACTGATCGTATAATTCACAGTGTAAAACTTGTAAAGACTATTGGTGCTGTACTATCCATGAACATAGATCACGGCTCAAAACATCTTGCTGTTGGTTCTGATCAAGGATATGTTTCAGTTATTGATATGAATGGCTCAACTTTGTTCTATCAGAGACAAATCACAAGTGAGATTAGTACCGGTATCATCTCTCTACAGTTCCGAACATGCAGTTTGCAGGGTTTTAAGAAAAACGTTTTGGCTGTTGGAACAAAGGATTCATCTGTTTTGGCACTTGATAGTGATACTGGAAACCAAATGAGCACTGACACTGTTCATCCTAAGAAGCCGTCTAGAGCTCTGCTAATGCAAGTGTTAGGTGGACAAGGAGAATTAACCAAGGGATTGGGTACAAGCGAGGCGAATGATATTGATGATGCAACAACAAAGCAATTGTGCGTTTTGTTGTGTTCTGAGAAAGCTTTGTATGTTTATTCTTTTGTGCATGTTGTTCAGGGTGTTAAAAAGGTGCTTCACAAGAAGAAGTTTCATTCCTCATCTTGTTGCTGGGCGTCCGCATTCTACAGTCATTCTGATATTGGACTTATTCTCCTTTTCACCAATGGAAAAGTAGAACTAAGGTCTTTGCCAGAATTGTCCCTGATCGTGGAGACCTCAATCAGAGATTTCACTTATTCACCTCCGAAATTAAAGTCATTTTCTGATAGACAAATGTGCTGTTCATCTGAAGGGGATCTTGTTATGGTGAACGGTGACCAGGAAATTTTGGTTGCCTCAATGTTGGCCAACAGGGATGTTTTCAGGCTTTTCGACTGCGTCAGCTGTATCTATACGAAAGAAATATCACAAGAAGACACTGTCCCAGCCCCAGTAATCCACAAGGAAAAGAAAAAGGGTATGTTTAGCTCTGTTATCAAAGATTTTACTGGAAGCAAAGAAAAGCACGTGACCCTCTTGGAAAAAGAAGACACAAAAGAAAGCATACAACAACTCTCAGTGATCTTTTCTAATGCAAATTTTCCAAGTGATGCTGACAATAAAGATAACCTTTCCATGGATGAGGATGAGCTTGAATTAAACATAGACGACATTGACCTGGAGGATCCTGGAGAAAAACGCAAAGATCAGAGGATACTAGGAACTCTCAATAAGAAGAATTTGGCTGGCAAATTTCAGGCTCTAAAAGGAAAGTTGAAAGACATGAAGGGCAACGTTCAGAAAACATCAGATAAGGAAGAGCAACAGGATAAGAAAGGTGGTGCAGTTGATCAAATCAAGAAAAAATATGGGTTTTCTTCTTCCTCCGATGAAACAAGCACTGCTAAATTAGCACAGAACAAGTTGCAGGAAAACATGCGGAAGCTGCAGGGTATCAATCTTCGAACTACACAGATGCAGGATACAGCAAAATCATTTTCATCATTGGCAAAACAGGTCCTGCGAACTACCGAACGGGACAAACGTTGA 3528 0.4218 MFPHIRFLGPLPTTSQPSPPNAFFSFPFPGPSLLHHGLALLFCFCSTNFKSFNIKLLYLLIRPEGGTTLPYPILIPIESKSPSKNRNQLLSPQSTTDSLSVFGYHKAIAALSPLSLSPIWSRFTHLHLAMFVKKLVDKASVKKPGGNSDGFKASDLDARLVFHYGVPSNGAKLAYDNNQKILALSTKDGRIKLFGKHNTQAILQSPEPVPSRFLQFIQNQGILINVTLNNHIEVWDIDKKQLADEYVVKEEITSLAVIQHSFYMYIGDSVGNISVFSLDQEPWRIVQMKYIIPLSASYGSPTEVSDDIAVTHLLLQPAAESKRVLIIFRNGQIILWDIQESKSIFRTGGNISQPSYNEAKKATSACWACPFGSKVVVGYSNGELLIWNISSQNVGNDSASDCTTQNTPTFKLNLGYKSDKIPVDSVKWIYAEGKASRLYVMGASDTASPNLVQVVLLNEKTESRTVKLGLHLAECCIDMEVLSTSSEQSKQKQDSFILLAKSGRVYVYDDSLIERYLLQCQSKSSPSLPKEVMIKLPLSDSSISAAKFISDNPNLRNADNEEYVQLLKNYPPLIPIEGKHKDAPILNSSNFTGFSKVKNLYITGHSDGAITFWDASCPLFIPILQLKQQSEHEFSTSGIPITALYFDANTPLLVSGDQSGMVRIFRFKPEPYSSNSFVSLTGGTKKATDRIIHSVKLVKTIGAVLSMNIDHGSKHLAVGSDQGYVSVIDMNGSTLFYQRQITSEISTGIISLQFRTCSLQGFKKNVLAVGTKDSSVLALDSDTGNQMSTDTVHPKKPSRALLMQVLGGQGELTKGLGTSEANDIDDATTKQLCVLLCSEKALYVYSFVHVVQGVKKVLHKKKFHSSSCCWASAFYSHSDIGLILLFTNGKVELRSLPELSLIVETSIRDFTYSPPKLKSFSDRQMCCSSEGDLVMVNGDQEILVASMLANRDVFRLFDCVSCIYTKEISQEDTVPAPVIHKEKKKGMFSSVIKDFTGSKEKHVTLLEKEDTKESIQQLSVIFSNANFPSDADNKDNLSMDEDELELNIDDIDLEDPGEKRKDQRILGTLNKKNLAGKFQALKGKLKDMKGNVQKTSDKEEQQDKKGGAVDQIKKKYGFSSSSDETSTAKLAQNKLQENMRKLQGINLRTTQMQDTAKSFSSLAKQVLRTTERDKR 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2467 1175 SMART WD40_4 349 388 IPR001680 GO:0005515
Alju09g2467 1175 SMART WD40_4 529 614 IPR001680 GO:0005515
Alju09g2467 1175 SMART WD40_4 694 729 IPR001680 GO:0005515
Alju09g2467 1175 SMART WD40_4 239 277 IPR001680 GO:0005515
Alju09g2467 1175 SMART WD40_4 627 666 IPR001680 GO:0005515
Alju09g2467 1175 Coils Coil 1034 1054 - -
Alju09g2467 1175 MobiDBLite consensus disorder prediction 1089 1108 - -
Alju09g2467 1175 CDD R-SNARE_STXBP5_6 1111 1171 - -
Alju09g2467 1175 Pfam Lethal giant larvae(Lgl) like, C-terminal 850 952 IPR013905 -
Alju09g2467 1175 SUPERFAMILY NHL repeat 701 936 - -
Alju09g2467 1175 Gene3D - 625 801 IPR015943 GO:0005515
Alju09g2467 1175 Gene3D - 158 290 IPR015943 GO:0005515
Alju09g2467 1175 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 134 1169 - -
Alju09g2467 1175 Gene3D - 300 624 IPR015943 GO:0005515
Alju09g2467 1175 FunFam Syntaxin-binding protein 5 isoform A 151 310 - -
Alju09g2467 1175 SUPERFAMILY WD40 repeat-like 173 737 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2467 Alju-ChrAlju09 47544206 47553877 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2467 09 47544206 47553877 Alju09g2467 09 47544206 47553877 ECH