Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2448 ATGAAGGAAGTTCCGTCAGCGTGCTCTGCAAATTACGTGCCCTTGACGCCTATCATATTCTTGGAACGAGCAGCCACTGTGTACGCTGATAAGCCATCCATCGTCTGCGGTGGTGTAAGGTTTTCGTGGAAGGAAACCCATGGAAGGTGCCTCAGCCTCGCTTCTGCTTTGCACAACCTCGGGATTTCTCACCTTCATATTGTTGCAGCTTTGGCACCAAATATTCCAGAGCTCTATGAGCTGCATTTCGCGGTTCCGATGGCGGGGGCAGTTATTTCTGCACTCAACACCAAGCTGGACGCCACAACATTGTCTGTGATATTGGAACAATTAGAAGCTAAAATTATGTTTGTGGACTATCAGTTCATTGAAGTTGTCCTTAACTCGTTCAACATAATGTCTCAAGGAAAATGTAAGCCTCCCCAGCTGGTCGTTATCCCTGATTATAACAAACAACCATCTTTCATTTCTAAGAATCTGCCACCAGATACCCTCAACTTCAACCAACTTCTTGAAAAGGGACGAGCAGATTTTGAGATCAGAATGCCCCCCAATGAATGCGATCCTATATCAGTGAACTATACGTCAGGGTCCACGGGGACTCCTAAAGGAGCTGTTTACAGTCACAGAGGTGCCTATCTTAATTCATTGGCAGCTATCTCGCGGTTCGATATGAAACCAATGCCCGTGTTTCTGTGGACTGTGGACATGTTTCGCTGCAATGGGTGGTGCTTTACTTGGGCAATGGCTACTCTGGGTGGCACCAATATTTGTCTCAGAAATGTCTCAGCGAGGGCCATGTTTGATGAAATCTCTCTTCACAACGTAACCCATTTGTGCGGCCCACCCGCACTTTTGAACGTAATTGCAGATGCACCGCAAAGCGAGAAGAAGCCTCTGCCTCTGGGGGTGAGCATCACTGTTGCTGGAGTGCTGCCACCATTCCAAGTTTTTCACAAGGTTGCAGAACTTGGGTTCAGTGTGAACGTTGGATATGGCATGACGGAAGCAATGGGTCCTGTATTGGTGCGACCTTGGAAGCCCAATTCAGGTGATGAACTCACTGAACATATCAGTTATGGAGATCAGGGGCTTCCCATATTTATGATGGAAGGGATGGATGTGAAAGATCCAAACACAATGAACAGTACTCCTTGTGATGGGAAAACCATTGGAGAGATTATGTTTAAAGGCAACACTATGATGCTGGGGTACCTTAAGAATCAGCAATTAACCAAGGAAGCTTTTAGAGAGGGATGGTACAGAACAGGGGACCTTGGAACGAAGCAGAAGGATGGTTCCATAAGACTGAAGGACAGAGCAAAAGATATGATATATTCGAGTGGAGAGGCAGTGAGCTCACTTGAGGTGGAGGCTGTGTTACTGAGCCACCCAAAGGTTCTGAATGCTGCAGTTGTGGGGAAATATGATGAACAAATGGTGGAGTCGCCCTTTGCGGTTATCAAACTGAAAGAAGGATGTTGGGCCACCGTGGAAGATATTATCAGGTTTTGTAAAGCAAGGTTGGATACTCGTATGGTTCCTCAGAGTGTGGTTTTTGGGGATTTGCCTGTTAATTCAACTGGCAAGGTTCAAAAATTTCTCATCAGAGAGAAGATCAAATGCGGTGGATGA 1635 0.463 MKEVPSACSANYVPLTPIIFLERAATVYADKPSIVCGGVRFSWKETHGRCLSLASALHNLGISHLHIVAALAPNIPELYELHFAVPMAGAVISALNTKLDATTLSVILEQLEAKIMFVDYQFIEVVLNSFNIMSQGKCKPPQLVVIPDYNKQPSFISKNLPPDTLNFNQLLEKGRADFEIRMPPNECDPISVNYTSGSTGTPKGAVYSHRGAYLNSLAAISRFDMKPMPVFLWTVDMFRCNGWCFTWAMATLGGTNICLRNVSARAMFDEISLHNVTHLCGPPALLNVIADAPQSEKKPLPLGVSITVAGVLPPFQVFHKVAELGFSVNVGYGMTEAMGPVLVRPWKPNSGDELTEHISYGDQGLPIFMMEGMDVKDPNTMNSTPCDGKTIGEIMFKGNTMMLGYLKNQQLTKEAFREGWYRTGDLGTKQKDGSIRLKDRAKDMIYSSGEAVSSLEVEAVLLSHPKVLNAAVVGKYDEQMVESPFAVIKLKEGCWATVEDIIRFCKARLDTRMVPQSVVFGDLPVNSTGKVQKFLIREKIKCGG 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2448 544 CDD ttLC_FACS_AEE21_like 12 538 - -
Alju09g2448 544 Gene3D - 4 441 IPR042099 -
Alju09g2448 544 Pfam AMP-binding enzyme C-terminal domain 456 530 IPR025110 -
Alju09g2448 544 ProSitePatterns Putative AMP-binding domain signature. 192 203 IPR020845 -
Alju09g2448 544 PANTHER ACYL-ACTIVATING ENZYME 2 541 - -
Alju09g2448 544 SUPERFAMILY Acetyl-CoA synthetase-like 14 540 - -
Alju09g2448 544 Gene3D - 442 542 IPR045851 -
Alju09g2448 544 Pfam AMP-binding enzyme 21 446 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2448 Alju-ChrAlju09 47390448 47396159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2448 78 541 Miscellaneous Gene Families AT1G20560 49.142 1.27e-160 464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2448 09 47390448 47396159 Alju09g2448 09 47390448 47396159 ECH