Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2397 ATGAAAATGACAGCAATCCCTGAGAGCAAACCTCGTTTCTGTACATTTTATAAACTATCTATAAGCTGCCGATTCATACTAGGTTGGTTCCTCCTAAAATCTACGACGATGGTGCTCGAGGCAACAATGATCTGTATTGACAATTCTGAATGGATGCGTAATGGAGATTACGCACCTTCTCGATTTCAAGCTCAAGCAGATGCTGTCAATCTTATCTGCGGTGCTAAAACACAGGCTAATCCAGAGAATACAGTCGGAGTTCTCACAATGGCAGGGAAGGGAGTTCAGGTTTTGGTGACTCCAACCAGTGATCTGGGCAAGATCTTAGCTTGCATGCATGGACAAGAAATAGGTGGGGAAATGAACCTAGCCGCTGCTATTCAAGTGGCTCAATTGGCTCTGAAGCATCGGCAAAATAAGAAACAGCAGCAAAGAATTATCATTTTTGCTGGAAGTCCTGTCAAGCATGAGAAGAAGGTGCTGGAGATGATTGGGAGAAAACTTAAAAAGAACAGTGTAGCCCTCGACATTATCAATTTTGGTGAAGAAGATGAAGGCAAGACTGAAAAACTGGAAGCACTTCTTGCAGCCGTTAATAATAATGATACAAGCCACAATGTCCATGTTCCAGCTGGTCCCAATGCTCTTTCTGATGTGCTTATAAGTACACCTATTTTTACTGGGGATGGGGAAGGTGGAAGTGGTTTCGCTGCTGCAGCAGCTGCAGCTGCAGCTGGTGGTGTATCTGGTTTTGAGTTTGGTGTGGATCCAAACTTGGATCCTGAGCTGGCTCTTGCTTTAAGAGTTTCAATGGAAGAGGAGAGGGCTAGACAGGAGGCAGCTGCAAAAAAGGCGGCTGAGGATGCTGCCAAACAGGAGAAAGGAGGAGATGAGCAAGCCAGTTCACAAGATGCAACAATGACTGAGCGAACCAGTGCTGCAACATCCGAAGCTGATAACAAGACAAATGATTTGATGGATGATGAGAATGCTCTCCTGCAGCAAGCACTTGCAATGTCAATGGATGATCCTGCCATTAACCATGACTCAAGAGATACAGATATGTCAGAAACAACTGCAGAAGATCCCGATTTGGCCCTTGCTCTTAAATTGTCGGTAACAGACAATACAAAGGACTCAGCAAGCCAGTCAGACATGAGTAAATTGTTGGCTGATCAGTCCTTCGTATCCTCTATCCTTGCTTCACTTCCTGGGGTTGACCCAAATGACCCATCTGTCAAAGATCTGCTGGCCTCCATGCAAAGTCAGTCTGAGCCCCAGCAGAAGAATGAAGATAAGCCGCCAAATGAGGAGGAAAAGAAATGA 1326 0.4517 MKMTAIPESKPRFCTFYKLSISCRFILGWFLLKSTTMVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQANPENTVGVLTMAGKGVQVLVTPTSDLGKILACMHGQEIGGEMNLAAAIQVAQLALKHRQNKKQQQRIIIFAGSPVKHEKKVLEMIGRKLKKNSVALDIINFGEEDEGKTEKLEALLAAVNNNDTSHNVHVPAGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDAAKQEKGGDEQASSQDATMTERTSAATSEADNKTNDLMDDENALLQQALAMSMDDPAINHDSRDTDMSETTAEDPDLALALKLSVTDNTKDSASQSDMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQSQSEPQQKNEDKPPNEEEKK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2397 441 Gene3D von Willebrand factor, type A domain 39 222 IPR036465 -
Alju09g2397 441 SMART uim 360 379 IPR003903 -
Alju09g2397 441 SMART uim 258 277 IPR003903 -
Alju09g2397 441 SMART uim 328 347 IPR003903 -
Alju09g2397 441 MobiDBLite consensus disorder prediction 415 429 - -
Alju09g2397 441 Gene3D - 256 342 - -
Alju09g2397 441 MobiDBLite consensus disorder prediction 278 324 - -
Alju09g2397 441 MobiDBLite consensus disorder prediction 299 320 - -
Alju09g2397 441 FunFam 26S proteasome non-ATPase regulatory subunit 4 39 222 - -
Alju09g2397 441 FunFam 26S proteasome regulatory subunit N10 256 342 - -
Alju09g2397 441 SMART VWA_4 38 211 IPR002035 -
Alju09g2397 441 Pfam Ubiquitin interaction motif 328 343 IPR003903 -
Alju09g2397 441 Pfam Ubiquitin interaction motif 361 372 IPR003903 -
Alju09g2397 441 Pfam Ubiquitin interaction motif 260 273 IPR003903 -
Alju09g2397 441 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 258 277 IPR003903 -
Alju09g2397 441 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 37 433 IPR027040 GO:0006511|GO:0008540
Alju09g2397 441 MobiDBLite consensus disorder prediction 278 298 - -
Alju09g2397 441 Pfam von Willebrand factor type A domain 42 151 IPR002035 -
Alju09g2397 441 SUPERFAMILY vWA-like 40 215 IPR036465 -
Alju09g2397 441 Coils Coil 268 293 - -
Alju09g2397 441 CDD PSMD4_RAZUL 381 425 - -
Alju09g2397 441 Coils Coil 436 441 - -
Alju09g2397 441 MobiDBLite consensus disorder prediction 401 441 - -
Alju09g2397 441 CDD VWA_26S_proteasome_subunit 37 224 - -
Alju09g2397 441 ProSiteProfiles VWFA domain profile. 41 225 IPR002035 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2397 09 46909076 46916206 Alju09g2397 09 46909076 46916206 ECH