Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2371 ATGGCGTCCCAGGACAAGCCCGCTGGATCTGGATCTGGATCTGGATCTTCATCTTCTCCCGCAGCCGCTAATGGCGACGTTTCTCCTCCGCGCAAGGTGGCATTGATCACCGGCATCACCGGCCAAGATGGTTCCTACCTCACTGAATTCCTCCTCAACAAAGGCTACGATGTCCATGGCCTTATTCGCCGATCCTCTAACTTCAACACCCAGCGAATCAATCACATCTACATCGACCCCCACAACACCCACAAGGCTCGAATGAAGCTTCATTATGCCGATCTCTCAGATGCCTCCTCCCTCCGTCGATGGCTCGACACAATCCTCCCCGACGAGGTTTACAATCTGGCTGCCCAGTCACATGTCGCCGTTTCGTTCGAGATCCCCGATTATACCGCCGATGTTGTCGCCACTGGTGCGCTCCGGCTCCTCGAGGCTGTTCGCTCTCACATCGCCGCCACCGGTCGTAGCCATATACGCTATTACCAGGCCGGATCATCCGAAATGTTCGGTTCCACCCCACCTCCGCAATCGGAGACTTCCCCATTTCATCCTCGCTCTCCTTATGCTGCGTCGAAATGCGCCGCGCATTGGTACACCGTCAATTATCGCGAGGCTTACGGGCTCTTTGCCTGCAATGGGATACTCTTCAACCACGAATCGCCGAGGCGAGGTGAGAATTTCGTGACCCGGAAGATCACGCGCGCTGTGGGTCGGATCAAGATAGGCTTGCAGCGCAAATTGTTCTTGGGGAATTTGCAGGCTTCGAGGGATTGGGGTTTTGCTGGGGACTATGTGGAGGCTATGTGGATGATGCTGCAGCAGGATAAGCCGGACGATTACGTTGTGGCGACCGAGGAATCCCATACAGTGGAACAGTTCTTGGAGGTCGCATTTGGCTACGTGGGTTTGAATTGGAGGGATCATGTGGAGATTGACAAGAGGTACTTTAGGCCTGCGGAGGTTGACAATCTCAAGGGAGATTCAAGTAAGGCTAGGAAAGTGCTTGGGTGGAAGCCCAAGGTGGGTTTTGAGCAGTTGGTGAAGATGATGGTGGATGAGGACGTTGAATTGGCCAAGAGGGAGAAGGTGCTTGTTGATGCTGGCTACTTGGATGCTCAGCAACAACCTTGA 1134 0.5423 MASQDKPAGSGSGSGSSSSPAAANGDVSPPRKVALITGITGQDGSYLTEFLLNKGYDVHGLIRRSSNFNTQRINHIYIDPHNTHKARMKLHYADLSDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETSPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQRKLFLGNLQASRDWGFAGDYVEAMWMMLQQDKPDDYVVATEESHTVEQFLEVAFGYVGLNWRDHVEIDKRYFRPAEVDNLKGDSSKARKVLGWKPKVGFEQLVKMMVDEDVELAKREKVLVDAGYLDAQQQP 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2371 377 Hamap GDP-mannose 4,6-dehydratase [gmd]. 32 361 IPR006368 GO:0008446|GO:0019673
Alju09g2371 377 NCBIfam GDP-mannose 4,6-dehydratase 32 358 IPR006368 GO:0008446|GO:0019673
Alju09g2371 377 PANTHER GDP-MANNOSE 4,6-DEHYDRATASE 16 367 IPR006368 GO:0008446|GO:0019673
Alju09g2371 377 MobiDBLite consensus disorder prediction 1 29 - -
Alju09g2371 377 CDD GDP_MD_SDR_e 33 357 - -
Alju09g2371 377 Gene3D - 35 341 - -
Alju09g2371 377 Pfam GDP-mannose 4,6 dehydratase 35 351 IPR016040 -
Alju09g2371 377 Gene3D - 225 351 - -
Alju09g2371 377 MobiDBLite consensus disorder prediction 1 24 - -
Alju09g2371 377 FunFam GDP-mannose 4,6-dehydratase 35 233 - -
Alju09g2371 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 32 357 IPR036291 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2371 33 217 Miscellaneous Gene Families AT4G12250 29.016 1.92e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2371 09 46719989 46721122 Alju09g2371 09 46719989 46721122 ECH