Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2303 ATGACCGCCGCAAGATTATCATCGTGCGTAGCCATGGCTGCAGCCGTGGCTGCTATGTCCACTCTCTCCAATAAGGCTTATGCCGAGACCTCCTTTCGGTTCCCTCTTCTCTCTCCTTCGTCGTCTACTTCAGCTCCTCAGGTGGATAAGAATTCTGATACTAAGTCAGAATCTCAAGCTGCTGATGAACCCAAAAAGTCAGGTTTTGATCCGGAATCGTTAGAACGCGGGGCAAAAGCTCTCCGCGAAATCAATTCTTCTCCGTATTCTAAACAGGTTTTTGATTTAATGAGAAAGCAGGAACAAACTCGCCTTGCTGAGTTAGATGCCGAAAAAGTTCATTATGAACTTGTTCAGTCTCAAGTTGATATTGATAGGCAGCGGAAATTAGCTGAAGAACAGCGGAATCTTATACAGGAGCAGGCTCAGAGGCAGGCCCAGGTGATGCGATATGAAGATGAACTGGCTAGGAAAAGAATGCAGGCAGATCATGAAGCTCAGAGAAGACATAACGTTGAATTGGTGAGGATGCAAGAGGAATCCTCTGTTAGAAAGGAACAGGCAAGGCGAGCTACTGAAGAACAGATTCAAGCTCAGCAGCGTCAAACTGAGAGAGAGAGAGCTGAAATAGAAAGGGAAACCATAAGAGTTAAGGCCATGGCAGAGGCAGAGGGCCGTGCCCATGAAGCGAAACTCACTGAGGAGCAGAGTAGTAGAATGCTTAGAGACAAGATGCAGGGTGAAAAAGACAAATGGCTTGCTGCAATTAATACAACTTTTAGTCATATTGAAGGTGGCTTAAGGGTCTTATTGACTGATAGGGACAAATTGCTTATGACCGTGGGAGGGGTTACAGCATTAGCTGCAGGAGTATATACAACTAGAGAAGGTGCTAAAGTGACATGGGGCTACATTAATCGGATTTTGGGCCAGCCATCATTGATCCGGGAGTCATCCATTGCGAAATATCCGGGTTCAAGGATCATATCTCAAGCCAAAAATAAAGCTTTAAGTTATAGTACCATGGCCAAGGCGGAAAAACTTTCTGAGAGTAAAACTGGCCTTGAAAATGTAGTACTCCATCCATCACTGCAGAGAAGAATAGAGCATCTAGCACGGGCTACATCAAATACCAAGGCCCACCAGGCACCGTTCCGTAATATGCTCTTTTATGGCCCTCCTGGGACTGGTAAAACGATGGTTGCAAGGGAAATTGCTATAAAATCGGGTTTAGATTATGCCATGATGACTGGAGGAGATGTCGCACCTCTGGGCCCTCAGGCTGTTACCAAAATCCATGAGATATTTGATTGGGCCAAGAAATCTAGAAAAGGCTTGCTGCTTTTTATTGATGAGGCAGATGCATTCCTTTGCGAGCGTAACAGCACACACATGAGCGAAGCTCAACGAAGTGCTCTAAACGCATTGCTCTTCAGAACTGGCGATCAGTCAAGAGACATAGTACTTGTCCTTGCCACAAACAGACCGGGTGATCTTGACAGCGCGGTGACTGACCGCATTGATGAGGTGATTGAATTCCCACTTCCTGGGGAGGAAGAACGTTTCAAATTGTTGAAGCTCTATTTGAACAAATACCTGAGCGAAGACAATGGCAGCTCATCCATACTCAGGAAACAGGCTCAAAAAATTGTCATGAAGGATATATCTGAGGATGTGCTCAAGGAGGCTGCGAAGAAAACTGAGGGATTCTCAGGCCGAGAGATAGCCAAATTGGTTTCCGGCATCCGAGCAGCCGTGTATGGACGCCCAGACTGTACTTTGGATTCTCAGTTGTTTAGAGAAATGGTAGATTACAAGGTTGGCGAACATCATCAACGTATAAAACTGGCGACTGAAGGCGGTCTCCCTGACAATATCTAG 1881 0.4588 MTAARLSSCVAMAAAVAAMSTLSNKAYAETSFRFPLLSPSSSTSAPQVDKNSDTKSESQAADEPKKSGFDPESLERGAKALREINSSPYSKQVFDLMRKQEQTRLAELDAEKVHYELVQSQVDIDRQRKLAEEQRNLIQEQAQRQAQVMRYEDELARKRMQADHEAQRRHNVELVRMQEESSVRKEQARRATEEQIQAQQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEEQSSRMLRDKMQGEKDKWLAAINTTFSHIEGGLRVLLTDRDKLLMTVGGVTALAAGVYTTREGAKVTWGYINRILGQPSLIRESSIAKYPGSRIISQAKNKALSYSTMAKAEKLSESKTGLENVVLHPSLQRRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIAIKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSRKGLLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERFKLLKLYLNKYLSEDNGSSSILRKQAQKIVMKDISEDVLKEAAKKTEGFSGREIAKLVSGIRAAVYGRPDCTLDSQLFREMVDYKVGEHHQRIKLATEGGLPDNI 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2303 626 ProSitePatterns AAA-protein family signature. 487 506 IPR003960 GO:0005524|GO:0016887
Alju09g2303 626 PANTHER PUTATIVE ATP-ASE 19 619 - -
Alju09g2303 626 Pfam ATPase family AAA domain-containing protein 3, N-terminal 50 316 IPR021911 -
Alju09g2303 626 Coils Coil 124 144 - -
Alju09g2303 626 Pfam ATPase family associated with various cellular activities (AAA) 388 515 IPR003959 GO:0005524|GO:0016887
Alju09g2303 626 MobiDBLite consensus disorder prediction 38 54 - -
Alju09g2303 626 MobiDBLite consensus disorder prediction 161 192 - -
Alju09g2303 626 Coils Coil 182 216 - -
Alju09g2303 626 SMART AAA_5 384 517 IPR003593 GO:0016887
Alju09g2303 626 MobiDBLite consensus disorder prediction 220 239 - -
Alju09g2303 626 FunFam ATPase family AAA domain-containing protein 3 342 532 - -
Alju09g2303 626 MobiDBLite consensus disorder prediction 55 73 - -
Alju09g2303 626 MobiDBLite consensus disorder prediction 38 73 - -
Alju09g2303 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 605 IPR027417 -
Alju09g2303 626 Gene3D - 329 533 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2303 Alju-ChrAlju09 46122477 46126975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2303 364 588 Miscellaneous Gene Families AT5G53170 30.769 2.62e-15 77.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2303 09 46122477 46126975 Alju09g2303 09 46122477 46126975 ECH