Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2282 ATGGTTCACAGTGCCTACGATTCTTTCCAACTCCTCGACAATTGTCCTTTGAAGATCGAAGCTGTCGAATCTTATGGCTCTAAGCTCCTCCTGGGCTGCTCTGATGGCTCCCTCCGAATATACGCTCCAGAGTCATCCGATTCCGATCGGTCTCCGTCGGCCGATCAACAAGCTCAGGAGCTGCGGCAGGAAGCCTACGTGCTCGAAAGAAACTTGACTGGCTTTGCGAAGAAGCCTATCTTATCAATGGAGGTCTTGGAATCCAGGGAATTGCTACTTTCACTTTCCGAATCTATTGCTTTTCATCGTCTTCCTAATTTTGAAACCATAGCAGTCATCACCAAGGCCAAGGGCGCCAATGTGTTCTCCTGGGATGAACGAAGAGGTTTCTTATGCTTTGCGAGGCAAAAGAGGGTCTGTATTTTCAGACACGATGGTGGCAGAGGGTTTGTGGAGGTGAAAGAATTTGGTGTTCCCGATGTGGTGAAGTCGATGTCTTGGTGCGGTGAAAATGTATGTCTGGGGATTAGAAGAGAATATGTAATACTGAATGCTACAAATGGTGCGTTGTCTGAAGTATTTACCTCTGGGAGACTAGCGCCGCCTTTAGTGGTCTCTCTACCTTCTGGGGAACTTCTTCTTGGAAAGGAGAACATTGGGGTCTTTGTGGACCAAAATGGGAAACTTCTTCCAGAAGGCAGGATTTGTTGGTCGGAGGCTCCTGCAGAAGTTGTAATCCAAAAACCATATGGAATAGCCCTGCTGCCAAGATTTGTAGAGGTTCGATCCCTTCGAGATCCGTTTCCACTTATACAGACTGTTGTTCTTCGAAATGTTCGTCATCTTCGCCAAAGCAACAATTCTGTGATTCTTGCATTAGAAAATTCTGTTCACGGACTCTTCCCTGTTCCTCTTGGAGCCCAGATTGTCCAATTAACAGCATCTGGCGATTTTGAAGAAGCTCTGTCATTGTGCAAACTCCTTCCACCTGAAGATTCAAATCTCCGTGCTGCAAAGGAGGGTTCAATCCATATAAGATATGCTCACTATCTTTTTGAAAATGGGAGCTATGAGGAGGCAATGGAACATTTTCTTGCATCTCAAGTAGATATAACTTATGTTCTTTCTTTGTATCCATCCATTATCCTTCCCAAGACAACCATTGTTACTGAGCCAGAGAACTTGGGGGACATTTCGTTGGATGCATCATATCTCTCTAGAGATTCTTCGGGTCTGTCAGATGATATGGAAACCCCACCACCACCTTTGTCAGAATCTGATGCAGCACTTGAATCCAAAAAGACGAGTCATAATATGCTTATGGCTCTCATAAAGTTTTTGCAGAAAAAGAGATATAGTGTTATTGAGAAGGCCACTGCTGAGGGGACAGAGGAGGTTGTTTTAGATGCGGTTGGGGACAACGTTGTATCCTATAACAGTAGTAGGCTTAAGAAAACAAACAAGGGGCGTGGTAGTGTTCCTGTTAGTTCAGGAGCTAGGGAGATGGCTTCAATATTGGATACTGCACTTCTCCAAGCATTGCTTTTTACTGGACAATCTTCCTCTGCTCTAGAACTACTGAGAGTTCCAAACTACTGTGATTTGAAGATTTGTGAAGAGATACTTCGTAAAGGCAGCAATAATGTTGCTTTATTAGAACTTTACAAGTGCAATTCAATGCACCGAGAAGCTCTTTTGCTCCTTCATCAGTTAGTGGAGGAGTCAAAGTCAAAACCGTCTGAAGTTACACATAAGTTCAAGCCTGAGGCAATTATTGAGTATCTCAAGCCTCTGTGTAATTCAGACCCCATGCTTGTTCTGGAGTACTCAATGCTTGTTCTTGAAAGCTGTCCGACACAAACTATTGAGCTCTTTCTCTCTGGAAATATTCCTGCTGATATGGTGAACTCCTATTTGAAGCAACATTCCCCAAATATGCAGACTACTTACTTGGAACTCATGCTTGCAATGAATGAGAGTGCCATCTCTGGAAACTTGCAAAATGAAATGGTACAAATCTATCTTTCTGAAGTACTTGAGTGGCATGCTGATTTAAGTGCTAAACAGAAATGGGATGAGAAAGCTCTCTCCCCGACAAGGAAGAAATTATTGTCTGCTTTAGATAGTATATCAGGATACAATCCAGAAGCTCTATTGAAACGTCTTCCACCTGATGCTCTATATGAGGAGCGTGCTATACTGTTGGGTAAAATGAACCAACATGAATTGGCACTGTCTTTATATGTTCATAAGCTTCATGTTCCAGAATCAGCTTTGTCTTACTGTGATCGGGTTTATGAGTCTACAAATCATCCATCAGGAAAATCTCCCAACAACATATACCTATCTCTTTTGCAAATCTATTTAAATCCACGAAGGACAACCAACAGTTTTGAAAAGAGAATCATGAATCTATTATCTACCCAGAATACAAGCATTCCCAAGGTTAGTCATATGACATCAATAAGATCTAAAGCAGGCCGGGGAAGTAAAAAGATTGCAGCAATAGAAGGTGCAGAGGACACAAAAGTTAGTTTGAGCAGCACTGATAGTAGCCGGAGTGATGGTGATCTGGATGAAATTAGTGAGGAAAGTGGTAGTACTATCATGCTTGACGAAGTCCTTGATTTGTTGAGTCGCAGATGGGATAGAATAAACGGAGCTCAGGCTCTCAAACTTTTGCCAAGAGAAACTAAACTACAGAACTTGTGTCCATTTCTTGAACCTCTTGTGCGAAAATCTAGTGAAATGTACCGTAATCACTCAGTGATCAAGAGCTTGAGACAAAGCGAGAACCTTCAGGTGAAAGATGAGCTCTACAATCAGAGGAAAGCGGCTGTGAAGATAACCGGTGATAGCATGTGTTCACTTTGCCATAAGAAGATAGGGACTAGTGTATTTGCGGTCTACCCTAATGGAAAAACTCTGGTGCACTTTGTCTGTTTCCGAGATTCTCAGAGCATGAAAGCTGTGGCCAAAGGGTCGTCATTGAGGAAGCGGATGTAG 3006 0.4288 MVHSAYDSFQLLDNCPLKIEAVESYGSKLLLGCSDGSLRIYAPESSDSDRSPSADQQAQELRQEAYVLERNLTGFAKKPILSMEVLESRELLLSLSESIAFHRLPNFETIAVITKAKGANVFSWDERRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMSWCGENVCLGIRREYVILNATNGALSEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLLPEGRICWSEAPAEVVIQKPYGIALLPRFVEVRSLRDPFPLIQTVVLRNVRHLRQSNNSVILALENSVHGLFPVPLGAQIVQLTASGDFEEALSLCKLLPPEDSNLRAAKEGSIHIRYAHYLFENGSYEEAMEHFLASQVDITYVLSLYPSIILPKTTIVTEPENLGDISLDASYLSRDSSGLSDDMETPPPPLSESDAALESKKTSHNMLMALIKFLQKKRYSVIEKATAEGTEEVVLDAVGDNVVSYNSSRLKKTNKGRGSVPVSSGAREMASILDTALLQALLFTGQSSSALELLRVPNYCDLKICEEILRKGSNNVALLELYKCNSMHREALLLLHQLVEESKSKPSEVTHKFKPEAIIEYLKPLCNSDPMLVLEYSMLVLESCPTQTIELFLSGNIPADMVNSYLKQHSPNMQTTYLELMLAMNESAISGNLQNEMVQIYLSEVLEWHADLSAKQKWDEKALSPTRKKLLSALDSISGYNPEALLKRLPPDALYEERAILLGKMNQHELALSLYVHKLHVPESALSYCDRVYESTNHPSGKSPNNIYLSLLQIYLNPRRTTNSFEKRIMNLLSTQNTSIPKVSHMTSIRSKAGRGSKKIAAIEGAEDTKVSLSSTDSSRSDGDLDEISEESGSTIMLDEVLDLLSRRWDRINGAQALKLLPRETKLQNLCPFLEPLVRKSSEMYRNHSVIKSLRQSENLQVKDELYNQRKAAVKITGDSMCSLCHKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKAVAKGSSLRKRM 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2282 1001 PANTHER CNH DOMAIN CONTAINING 1 988 IPR032914 GO:0016192
Alju09g2282 1001 Pfam Vacuolar sorting protein 39 domain 2 875 983 IPR019453 -
Alju09g2282 1001 Pfam CNH domain 26 282 IPR001180 -
Alju09g2282 1001 SUPERFAMILY WD40 repeat-like 25 178 IPR036322 GO:0005515
Alju09g2282 1001 MobiDBLite consensus disorder prediction 409 428 - -
Alju09g2282 1001 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 609 796 IPR000547 GO:0006886|GO:0016192
Alju09g2282 1001 Pfam Vacuolar sorting protein 39 domain 1 506 614 IPR019452 -
Alju09g2282 1001 Pfam Region in Clathrin and VPS 634 764 IPR000547 GO:0006886|GO:0016192
Alju09g2282 1001 ProSiteProfiles Citron homology (CNH) domain profile. 16 289 IPR001180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2282 Alju-ChrAlju09 45982964 45990364 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2282 09 45982964 45990364 Alju09g2282 09 45982964 45990364 ECH