Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2260 ATGAAGTGCCCGTACTGTGCGGCGGCTCAAGGGCGTAGCGCCACCACCAGCTCTGCCCGCTCCATAACGGAGTGCACATCCTGCGGCCGAGTTGTTGAAGAGCGACAGACCCACCCTCATCATCTCTTCCACCTCCGCGCACAAGACAATCCTCTCTGTCTCGTCACTCCCGACATACCCTCCCTCCAACCCTTTCATCAAAGCCAAGTGGATGATGATCCCTTCGAGCCCACCGGCTTCATCACTTCATTTTCCACTTGGTCCCTTGAGCCCAGCCCTCTCTACCTCCAGCCCTGTCTTTCCTTCTCTGGCCACCTCGCCGAGCTTGAGAGGGCTCTCGAATCGTCCTCATCTTCATCCTCCTCTTCGACACCATCATCTTCAACTTCTTCGACGGTTGTGGTTGATAATTTGAGGGCGTACATGCAGATTATTGATGTCGCGTCGATACTTGGGTTGGACTACGATATCTCAGACCATGCGTTTCAATTATTCAGGGATTGTTGCTCGGCTACTTGTTTGAGAAACCGGAGCGTCGAAGCGCTTGCCACTGCTGCTCTTGTTCAGGCAATTAGAGAGGCTCAGGAACCCAGAACCCTTCAGGAAATTTCAATTGCAGCCAATGTGCCGCAAAAGGAAATTGGGAAATACATCAAGATACTTGGAGAGGCTTTGCAGCTCAGTCAGCCCATTAATAGCAATTCTATTTCAGTCCATATGCCTAGATTTTGTACCCTTCTACAACTGAATAAATCTGCTCAGGAACTGGCCACTCACATAGGAGAGGTTGTGATCAACAAATGCTTCTGCACTCGCAGGAATCCTATTAGCATTTCAGCAGCTGCTATATACCTGGCTTGCCAACTTGAAGACAAACGCAAAACCCAGGCAGAAATCTGCAAGGTGACTGGTCTTACTGAAGTCACTCTTCGGAAAGTGTATAAGGAACTTCTAGAGAATTGGGATGATTTGCTTCCCTCTAATTATACACCAGCTGTTCCTCCTGAGAGGGCATTCCCTACTACTGTAATTGCTTCAGGTCGTTCATCAGCAACTAAGGTTGATGCAATAGAGGTTAATTCTTCTTTAGACAGAGACAAGTTAATAGAAATTAAACCTAGCAAACCAAATGAAGTTCCAGTCCTGGTACATCAGCTGAGGGGCAAAGATGATGTTGAAAGCAAGAGCAATGCTTGCGCGACCCACTCGACACTGAATCAGCAGTCAGCTTTCTGGCAATCCCAACTTCCTATTGGGGCGTGTAATCATAGAACGACAGGAGAAAAAAGTTGGAATGTTTTACAAGGAATGGATGTAGAGGGACTACAGCATAACCACCTACAGCCTGAACTGAAGTCTGAAGACACAAATGGTATTAATATTAATCCTTTTCAAAAACCCAACCATCTTGGCAGTCCTTCGTCGTCGTCTGCTAGCCCTGTTATGAAGCCCTTTTCGGCTCCGCCTTCATCTACGCCTCCAAATGTTTGA 1491 0.4769 MKCPYCAAAQGRSATTSSARSITECTSCGRVVEERQTHPHHLFHLRAQDNPLCLVTPDIPSLQPFHQSQVDDDPFEPTGFITSFSTWSLEPSPLYLQPCLSFSGHLAELERALESSSSSSSSSTPSSSTSSTVVVDNLRAYMQIIDVASILGLDYDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSSATKVDAIEVNSSLDRDKLIEIKPSKPNEVPVLVHQLRGKDDVESKSNACATHSTLNQQSAFWQSQLPIGACNHRTTGEKSWNVLQGMDVEGLQHNHLQPELKSEDTNGININPFQKPNHLGSPSSSSASPVMKPFSAPPSSTPPNV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2260 496 CDD CYCLIN_TFIIB_archaea_like_rpt2 235 321 - -
Alju09g2260 496 MobiDBLite consensus disorder prediction 453 485 - -
Alju09g2260 496 FunFam Transcription initiation factor IIB 238 335 - -
Alju09g2260 496 Gene3D - 238 334 - -
Alju09g2260 496 SUPERFAMILY Cyclin-like 236 334 IPR036915 -
Alju09g2260 496 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 348 IPR000812 GO:0006352|GO:0070897
Alju09g2260 496 PRINTS Transcription initiation factor IIB signature 273 289 IPR000812 GO:0006352|GO:0070897
Alju09g2260 496 PRINTS Transcription initiation factor IIB signature 305 319 IPR000812 GO:0006352|GO:0070897
Alju09g2260 496 PRINTS Transcription initiation factor IIB signature 239 257 IPR000812 GO:0006352|GO:0070897
Alju09g2260 496 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Alju09g2260 496 PRINTS Transcription initiation factor IIB signature 184 203 IPR000812 GO:0006352|GO:0070897
Alju09g2260 496 PRINTS Transcription initiation factor IIB signature 210 225 IPR000812 GO:0006352|GO:0070897
Alju09g2260 496 FunFam Transcription initiation factor TFIIB 138 229 - -
Alju09g2260 496 SUPERFAMILY Cyclin-like 139 229 IPR036915 -
Alju09g2260 496 Gene3D - 138 229 - -
Alju09g2260 496 Pfam Transcription factor TFIIB repeat 140 221 IPR013150 GO:0017025
Alju09g2260 496 Pfam Transcription factor TFIIB repeat 238 319 IPR013150 GO:0017025
Alju09g2260 496 MobiDBLite consensus disorder prediction 453 496 - -
Alju09g2260 496 SMART cyclin_7 238 319 IPR013763 -
Alju09g2260 496 SMART cyclin_7 142 223 IPR013763 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2260 09 45849756 45853852 Alju09g2260 09 45849756 45853852 ECH