Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1906 ATGGCGCCAGTTTCTGCTCTTGCTAAGTACAAGCTGGTGTTCTTGGGTGATCAGTCGGTGGGCAAAACCAGCATCATCACTCGCTTCATGTATGATAAATTTGACACCACCTATCAGGCTACAATCGGTATTGATTTTCTATCCAAAACTATGTATCTTGAAGATCGAACCGTTCGACTGCAGCTGTGAATTAGAGCAAGGAAACGAGTTTTGAAGTTGGTGAATATTAAACAAGATGCCATTATTCATAAGGCATCTTGGAATCTGCATCGTCTGGCTCACATTTGTCTTTCTTTGTATGATGGCTCTATGCCCTACTTCTTGATGCACATTGGTGAATCAATGGATACAGCTGGACAGGAAAGATTTAGAAGTCTTATTCCAAGCTACATTAGGGATTCAGCTGTTGCTGTTATTGTCTATGATGTTGCAAGCCGGCAGACTTTTCTGAACACATCAAATTGGATTGAAGAGGTGCGAAATGAGAGAGGTAGTGATGTGATTATTGTTCTTGTGGGGAACAAAACTGACCTTGTGGATAAGAGGCAAGTCTCCACTGAGGAAGGGGAAGCAAAAGCCCGTGATCTGAATGCCATGTTTATTGAAGCTAGTGCCAAAGCTGGCTTTAATATAAAGGCCCTCTTTAGGAAAATTGCTACTGCGTTACCTGGCATGGAAACACTGTCTTCAACAAAACACGATGATATGGTTGATGTGAACTTGAAGTCTTCTAGTGGCCCTAATTCTCAACCTGAGTCGGGCGGATGTGCTTGTTGA 777 0.426 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLXIRARKRVLKLVNIKQDAIIHKASWNLHRLAHICLSLYDGSMPYFLMHIGESMDTAGQERFRSLIPSYIRDSAVAVIVYDVASRQTFLNTSNWIEEVRNERGSDVIIVLVGNKTDLVDKRQVSTEEGEAKARDLNAMFIEASAKAGFNIKALFRKIATALPGMETLSSTKHDDMVDVNLKSSSGPNSQPESGGCAC 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1906 258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 230 IPR027417 -
Alju09g1906 258 SMART ras_sub_4 7 225 - -
Alju09g1906 258 CDD Rab6 10 222 - -
Alju09g1906 258 SMART rab_sub_5 10 225 - -
Alju09g1906 258 ProSiteProfiles small GTPase Rho family profile. 3 228 - -
Alju09g1906 258 NCBIfam small GTP-binding protein domain 115 218 IPR005225 GO:0005525
Alju09g1906 258 Gene3D - 6 251 IPR027417 -
Alju09g1906 258 PRINTS Transforming protein P21 ras signature 200 222 - -
Alju09g1906 258 PRINTS Transforming protein P21 ras signature 10 31 - -
Alju09g1906 258 PRINTS Transforming protein P21 ras signature 165 178 - -
Alju09g1906 258 PRINTS Transforming protein P21 ras signature 33 49 - -
Alju09g1906 258 MobiDBLite consensus disorder prediction 238 258 - -
Alju09g1906 258 PANTHER RAS-RELATED PROTEIN RAB 10 229 - -
Alju09g1906 258 SMART rho_sub_3 12 224 IPR001806 GO:0003924|GO:0005525
Alju09g1906 258 ProSiteProfiles small GTPase Rab1 family profile. 5 258 - -
Alju09g1906 258 Pfam Ras family 11 62 IPR001806 GO:0003924|GO:0005525
Alju09g1906 258 Pfam Ras family 115 221 IPR001806 GO:0003924|GO:0005525
Alju09g1906 258 ProSiteProfiles small GTPase Ras family profile. 5 258 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1906 Alju-ChrAlju09 42935039 42943835 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1906 09 42935039 42943835 Alju09g1906 09 42935039 42943835 ECH