Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1884 ATGGGCTGCTGCAAAATATTCAGCTTTCTGTCGGTTGAATTTCACAGGCACGTGATTGTCACGGAGCAGCCCATATATCTCGTGTTCGCGGAATCAAACTTGTTTGTTTCTTCAGCGTTTTCGTTTCTGCTTCTGGCGCCTTCGGGCAAGAGCAGCGATAACCGAATCGGAAATCGTCAGCTGAAATCCGGTACTGTGCTGCCTGCCCTTCATCCAAAAATGGGCTGTCTCTCCTCTAAGGAAGCAAGTAAGAGAAAGTATCCTATGAGAGAGGACCCTTCAGTTCTTGCATCAGAAACAGCATTCAGTGTGAGCGAGGTTGAAGCACTGTTTGAGCTTTTTAAGAGCATCAGCAGTTCAGTCGTTGATGATGGATTAATCAGCAAGGAAGAGTTTAACTTGGCAATTTTCGACAATAAAAAGAAGGATAATCTCTTTGCCGGTCGAATCTTTGATATGTTTGATGTTAAGAAGAAGGGAGCCATTGATTTTGGCGATTTTGTTAGATCACTCAGCGTCTTCCACCCAAAAGCATCACTACAGGACAAAATAGATTGTAATGTTTGGGAATTTCTTGCAGTCTCATTTAGGCTTTACGATTTGCACAATACTGGTTTTATTGAGCGCCAAGTGGTCAAACAAATGTTAATTGCTTTTCTTTCAGAATCTGAAACGAAGTTGGCGGATGATGCATTAGAAAAAATTCTTGATAAGACTTTCTTGGATGCTGATATAAATCAAGATGGGAAAATAGACAAGTTCGAATGGGAAAACTTGGTTTCCAAGAACCCATCGCTACTAAAAGTCATGACCCTACCCTACCTGAGGGACATAACAACCACGTTCCCAAGCTTTATTTTTAATTCCAAGGTCGACGAAATCACAAAGTGA 891 0.4164 MGCCKIFSFLSVEFHRHVIVTEQPIYLVFAESNLFVSSAFSFLLLAPSGKSSDNRIGNRQLKSGTVLPALHPKMGCLSSKEASKRKYPMREDPSVLASETAFSVSEVEALFELFKSISSSVVDDGLISKEEFNLAIFDNKKKDNLFAGRIFDMFDVKKKGAIDFGDFVRSLSVFHPKASLQDKIDCNVWEFLAVSFRLYDLHNTGFIERQVVKQMLIAFLSESETKLADDALEKILDKTFLDADINQDGKIDKFEWENLVSKNPSLLKVMTLPYLRDITTTFPSFIFNSKVDEITK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1884 296 ProSiteProfiles EF-hand calcium-binding domain profile. 231 266 IPR002048 GO:0005509
Alju09g1884 296 Gene3D - 92 294 - -
Alju09g1884 296 SUPERFAMILY EF-hand 94 285 IPR011992 -
Alju09g1884 296 SMART efh_1 191 219 IPR002048 GO:0005509
Alju09g1884 296 SMART efh_1 235 263 IPR002048 GO:0005509
Alju09g1884 296 SMART efh_1 146 174 IPR002048 GO:0005509
Alju09g1884 296 ProSiteProfiles EF-hand calcium-binding domain profile. 142 177 IPR002048 GO:0005509
Alju09g1884 296 FunFam calcineurin B-like protein 3 92 293 - -
Alju09g1884 296 ProSitePatterns EF-hand calcium-binding domain. 244 256 IPR018247 -
Alju09g1884 296 PANTHER CALCINEURIN B 74 293 IPR045198 GO:0005509|GO:0019722|GO:0019900
Alju09g1884 296 Pfam EF hand 236 260 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1884 Alju-ChrAlju09 42640510 42644396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1884 74 295 EF-hand Containing Proteins AT4G17615 72.072 3.49e-110 316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1884 09 42640510 42644396 Alju12g0421 12 5112493 5115438 CCT
Alju09g1884 09 42640510 42644396 Alju09g1884 09 42640510 42644396 ECH