Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1634 ATGCACAAAAAGACCCTAATTCCTGGGCGCATCTCCTGCTCGCACCGCTTCCCGGGGGAGGACCACTCACACGATCGTAGTGAGAACAAATTCGGGCACTGCATTGCAGTGGGGCATAACGGAATGGGGAATCGACGGTTTACTCGGGTCGCTATCAGTGATGAAGAGGATGATACACCGCCTCGTCCAAAGCAGCAAAAGCAACAGCAACAATCTACGGTTACGGAGGAGAACCGGTCGAGGCAGCGTACCCGGAAGAGGATGAAGCTTCAAGAAGAGGAAGAAGACGAGGATGAGGAGGATGACAAGAAAAAGAAGAGAAAGCAAAAGGACAAGGATGAAGAAGGGTCTGTGAGTGTTGATGAAGAAGAGGAACCGCCGCAGGAGGACGCCAAGCCCATTGGCGATCCCGTTAGGGTCTCAGGAAAAGGAAGAGGGAGGAGGAAGCATTACGATTCCTTCGAGTTTGACGGGAACCAATATATACTTGAGGATCCTGTACTTCTTGTGCCTGAGGATAAAAACCAAAAGCCATATGTAGCAATTATCAAGGACATTACACAGTCCTTAAATGGCAGTATGATGGTGACAGGACAGTGGTTTTATCGTCCTGAAGAAGCTGAAAGAAAAGGTGGTGGAAGTTGGCAATCACGTGATACAAGGGAGCTGTTTTACAGTTTCCACCGTGATGAGGTTCCTGCAGAATCTGTTATGCACAAGTGTGTGGTTCATTTTATTCCCTTACACAAACAGCTTCCAAATCGCAAACAACATCCTGGGTTTATTGTGCAAAAGGTGTATGATACAGTAGAGAGGAAACTCTGGAAGCTTACTGATAAGGATTATGAGGACAGTAAACAGCATGAAATTGATGAACTTGTTCAAAAAACTGTAAAACGTATTGGTGAGATACCTGACCTTGTTGAGACTGAAGAAGCCCCTGCTGATCAGGAAGATCAACTGAAGAGTAAAAGAAGTTTTAGGAGAAGGAACATTTCACCTTTGGATGTTTCAAGAGATGAGGAGGCAACTCCAAAGAGCGAACAACACCTCAAACCAGAAACACCTGGAAGTTGTCTAACTAATACTTCAGAGCATTATCAAATATTAGCAAATTTCAAGGTACTAACTGGAGATTCCCATCGTGATAAATGGTTGGAACGGCTGCTTCAAAGCATTCAGTATATGTGTAACTTAGAAGGAGGTAAACAGAAGGAAGACAAAGCAAAGGACAATTCGAGTGCAATCAACCATGGAAGCAACAATGGCAGTTCAGTACCAAGTGATTATCAAGACAAGGATCAGAAGAGTTCTGAGTCTTTTGTTTGGCCAGACGCCGCTGTTCCAGCCATAGTTGCCTTGGAAAAAGCTTCACATGATACCCTTGCCTCAGATTATCAGAAGTATAACCAAAAATTACGGCAATTGGCCTTTAATCTCAAGAACCATAGATTAGCTCGACGTCTATTGAATGGGGAGTTGCAACCCACAAAAATACTGAATATGTCTCCTAATGAACTGAAGGAGGGCTTGGCTGCTGATGAAATAGCCAAGAACGAGCCAGATGAATCACAGCACATGCAGATGACTGATGCCCGCTGCTCAAGATGCATGGAATGTAAGGTGGGAGTGAGGGATATTATCCATGCAGGGCACGGGGACCGTTATCAGCTGGAATGTATTGGTTGTGGTAATTCCTGGTATGCTTCCCGAGATGCGGTATCTTACCTGACTATAGATGGATCGGATACTGCCAGAAGTGTAGGCACCGCACCATGGGCCACCGCCAAATTTGAAAATGTTGAGAAGAAGTTGGTGAGTCCTCGTGAATCCGACAAGTCAGCCAATGACATCTTTAAGAAAACAAGTGAAGCATATATGCCTGTTTTTGAAACCCAGAAGTCATTTGGGAAATCCAGGAAAGATGAGAGCACAGAACCTACGAAACACGCTGATTAG 1959 0.4497 MHKKTLIPGRISCSHRFPGEDHSHDRSENKFGHCIAVGHNGMGNRRFTRVAISDEEDDTPPRPKQQKQQQQSTVTEENRSRQRTRKRMKLQEEEEDEDEEDDKKKKRKQKDKDEEGSVSVDEEEEPPQEDAKPIGDPVRVSGKGRGRRKHYDSFEFDGNQYILEDPVLLVPEDKNQKPYVAIIKDITQSLNGSMMVTGQWFYRPEEAERKGGGSWQSRDTRELFYSFHRDEVPAESVMHKCVVHFIPLHKQLPNRKQHPGFIVQKVYDTVERKLWKLTDKDYEDSKQHEIDELVQKTVKRIGEIPDLVETEEAPADQEDQLKSKRSFRRRNISPLDVSRDEEATPKSEQHLKPETPGSCLTNTSEHYQILANFKVLTGDSHRDKWLERLLQSIQYMCNLEGGKQKEDKAKDNSSAINHGSNNGSSVPSDYQDKDQKSSESFVWPDAAVPAIVALEKASHDTLASDYQKYNQKLRQLAFNLKNHRLARRLLNGELQPTKILNMSPNELKEGLAADEIAKNEPDESQHMQMTDARCSRCMECKVGVRDIIHAGHGDRYQLECIGCGNSWYASRDAVSYLTIDGSDTARSVGTAPWATAKFENVEKKLVSPRESDKSANDIFKKTSEAYMPVFETQKSFGKSRKDESTEPTKHAD 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1634 652 MobiDBLite consensus disorder prediction 404 438 - -
Alju09g1634 652 Gene3D - 125 296 IPR043151 -
Alju09g1634 652 MobiDBLite consensus disorder prediction 49 63 - -
Alju09g1634 652 Coils Coil 74 110 - -
Alju09g1634 652 SMART BAH_4 159 278 IPR001025 GO:0003682
Alju09g1634 652 MobiDBLite consensus disorder prediction 15 32 - -
Alju09g1634 652 Pfam Transcription factor S-II (TFIIS), central domain 377 526 IPR003618 GO:0006351
Alju09g1634 652 MobiDBLite consensus disorder prediction 78 92 - -
Alju09g1634 652 ProSiteProfiles BAH domain profile. 159 278 IPR001025 GO:0003682
Alju09g1634 652 CDD BAH_plant_3 141 287 - -
Alju09g1634 652 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 42 647 - -
Alju09g1634 652 MobiDBLite consensus disorder prediction 635 652 - -
Alju09g1634 652 Gene3D - 361 509 IPR036575 GO:0006351
Alju09g1634 652 SMART mid_6 379 517 IPR003618 GO:0006351
Alju09g1634 652 MobiDBLite consensus disorder prediction 414 431 - -
Alju09g1634 652 Pfam BAH domain 160 276 IPR001025 GO:0003682
Alju09g1634 652 MobiDBLite consensus disorder prediction 100 116 - -
Alju09g1634 652 ProSiteProfiles TFIIS central domain profile. 381 535 IPR003618 GO:0006351
Alju09g1634 652 MobiDBLite consensus disorder prediction 1 151 - -
Alju09g1634 652 MobiDBLite consensus disorder prediction 311 360 - -
Alju09g1634 652 MobiDBLite consensus disorder prediction 315 349 - -
Alju09g1634 652 SUPERFAMILY Elongation factor TFIIS domain 2 375 508 IPR036575 GO:0006351
Alju09g1634 652 MobiDBLite consensus disorder prediction 630 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1634 Alju-ChrAlju09 40264077 40270780 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1634 09 40264077 40270780 Alju09g1634 09 40264077 40270780 ECH