Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1621 ATGTGGATGTTAGGATGGAACGGGCCATCTGGATTCTCAGCCAGTTCCACTGCGGAGCAAGTTACTGAAGGAATCGATGGGAATGGTCTCACTGCCATCGTCACAGGGGCATCAAGTGGTCTTGGTCTTGAAACCACCCGAGTTCTAGCATTGCGTGGTGTCCATGTGGTTATGGCAGTAAGGAATGTGGACTCTGGTATGAGCGTCAAAAACAAATTAGTTGAGGAAATCCCCTCTGCTAAAATTGATGTTATGAAGCTAGACCTTGGCTCAATGGCATCAGTAAGGAAATTTACTGCAGATTACAATTCCTCCGGTCTGCCTCTCAATATCCTAATTAATAATGCAGGAATTATGGCTGCCCCGTTCACACTTTCCCAAGACAACATTGAGTTGCAGTTTGCAACCAATCATTTAGGCCATTTTCTCTTAACAAATCTTTTATTGGAAACTATGAAGAAAACTGTGCACGAATGCAAGCGGGAGGGAAGAATAGTTATTTTATCATCAGAGGCACACAGATTTGCATATAATAAAGGGATTCGTTTTGATAAAATTAATGAAGAATCAGGATACAACAGTTATTTTGCTTATGGACAATCAAAGCTTGCTAATATCTTGCATGCAAAAGAGCTTTCAAGACGCTTGAAGGAAGAAGGAGTGGAAATAACTGCCAACTCCCTTCATCCTGGGTCTATTGTAACAAATATTCTTCGGTATCATGGTTTCTTTAATGCCGTGGCTAGCTTGGTGGTAAAGTTCTTCCTAAAAAATGTGCAGCAGGGAGCTGCAACTCAATGTTATGTGGCATTACATCCACAAGTGAAGGGAATATCCGGTGAATATTTTATGGATAGCAACAAGGCAAAACCAAACTCTCTCGCTACAGATTCTGAATTGGCCAGAAAGCTCTGGGAATTCAGTTTGAGCCTGACAGACCCAAAGTAG 948 0.4188 MWMLGWNGPSGFSASSTAEQVTEGIDGNGLTAIVTGASSGLGLETTRVLALRGVHVVMAVRNVDSGMSVKNKLVEEIPSAKIDVMKLDLGSMASVRKFTADYNSSGLPLNILINNAGIMAAPFTLSQDNIELQFATNHLGHFLLTNLLLETMKKTVHECKREGRIVILSSEAHRFAYNKGIRFDKINEESGYNSYFAYGQSKLANILHAKELSRRLKEEGVEITANSLHPGSIVTNILRYHGFFNAVASLVVKFFLKNVQQGAATQCYVALHPQVKGISGEYFMDSNKAKPNSLATDSELARKLWEFSLSLTDPK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1621 315 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Alju09g1621 315 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Alju09g1621 315 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Alju09g1621 315 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Alju09g1621 315 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Alju09g1621 315 Pfam short chain dehydrogenase 31 177 IPR002347 -
Alju09g1621 315 PANTHER RETINOL DEHYDROGENASE 9 312 - -
Alju09g1621 315 Gene3D - 23 314 - -
Alju09g1621 315 CDD retinol-DH_like_SDR_c_like 29 305 - -
Alju09g1621 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 287 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1621 Alju-ChrAlju09 40195037 40198386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1621 33 291 Acyl Lipid Metabolism Gene Families AT3G55290 28.727 6.48e-10 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1621 09 40195037 40198386 Alju09g1621 09 40195037 40198386 ECH