Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1613 ATGACAGACCCACGATCGTCTCTCACCACGTCGAAGCCCCTCTTCTTCGTTGAGCCAAAAAACACTGCCGTTCTCACAATTTCATCCCTCGTGATAGAGAAAGGCAATGTCGATATCAGGGAATTTCACCTTGAAGAGTTTATCTTCTCCTTCCATCTTTTGTTCTCAGCCTCTCACCCACACTACACTCCATTCTCAGAGAAAAGTAAGCAAGAAAATATGTCTTCACCCAGTAAACGTCGAGAGATGGACTTGATGAAGCTGATGATGAGCGATTACAAGGTGGAGATGATCAATGATGGCATGCAGGAGTTTTATGTTCATTTTCACGGGCCTAAAGAGAGTCCTTATCATGAAGGTGTATGGAAGATTAGAGTAGAGCTGCCTGATGCTTATCCTTATAAATCTCCATCCATTGGTTTTGTCAATAAAATATACCACCCTAATGTTGATGAAATGTCTGGCTCAGTTTGCTTAGATGTTATTAACCAGACCTGGAGTCCCATGTTTGACCTTGTTAATGTATTTGAAGTTTTTCTTCCTCAACTTCTTCTGTACCCCAACCCATCAGACCCATTGAATGGTGAAGCTGCTGCACTGATGATGCGTGATCGTGCTGTATATGATCAAAAAGTCAAAGAATATTGTGAAAAGTATGCCAAGCCAGAAGATGTCGGTGCTACCCAGGAGGACGAAAAATCTAGTGATGAGGAGCTGAGTGAAGACGATTATGGCTCTAGTGATGATGGAATTGCAGGGCAACCTGATCATTGA 774 0.4264 MTDPRSSLTTSKPLFFVEPKNTAVLTISSLVIEKGNVDIREFHLEEFIFSFHLLFSASHPHYTPFSEKSKQENMSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPKESPYHEGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRAVYDQKVKEYCEKYAKPEDVGATQEDEKSSDEELSEDDYGSSDDGIAGQPDH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1613 257 SMART ubc_7 77 221 - -
Alju09g1613 257 SUPERFAMILY UBC-like 77 221 IPR016135 -
Alju09g1613 257 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 146 162 IPR023313 -
Alju09g1613 257 MobiDBLite consensus disorder prediction 219 257 - -
Alju09g1613 257 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 102 209 - -
Alju09g1613 257 Pfam Ubiquitin-conjugating enzyme 83 215 IPR000608 -
Alju09g1613 257 Gene3D Ubiquitin Conjugating Enzyme 66 234 IPR016135 -
Alju09g1613 257 FunFam Ubiquitin-conjugating enzyme 5, E2 74 232 - -
Alju09g1613 257 CDD UBCc 80 216 IPR000608 -
Alju09g1613 257 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 73 221 IPR000608 -
Alju09g1613 257 MobiDBLite consensus disorder prediction 219 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1613 Alju-ChrAlju09 40122786 40127026 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1613 09 40122786 40127026 Alju09g1613 09 40122786 40127026 ECH