Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1600 ATGGGACACGGACACGGGGACAAAGTCCGACCTTCCAAAAAGTTCAAGGCCGCCGCGAAATTTGACGATTCCCGAAAAGGATTCGTCGACGATGACGATGCGTATATGGGTGATGATGGTTACGATGATGACGGTGAGAAAGAAGCCAAGGCCAAAGATTTTAGCAAATTAGAGCTGAAAAAGGATCATGCCAATCGACCACTTTGGGCTTGTGGCAATGGTCGGATATTCCTCGAGACCTTCTCTCCCTTGTACAAACAAGCTTACGATTTCCTTATTGCCATTGCAGAACCCGTTTGCAGGCCGGAGTCAATGCACGAATACAACCTCACTCCACATTCCCTGTATGCTGCGGTTTCAGTTGGTCTGGAAACAGAAACGATCATATCAGTTTTGAACAAGTTATCCAAGACAATGCTTCCTAAAGAGATGATCAAGTTTATTCAGGATTCAACTGCAAATTATGGCAAAGTAAAGCTTGTACTTAAGAAAAATCGATACTTTATTGAATCTCCATTTCCAGAGGTATTGAAGACACTGCTCAGAGATGAAGTTATATCTCGATCAAGGATCACTTCTGAGAGTGCAGCTGGAGATGGATTTACTATTAGCAAAACAGCAGGTGAAATTGAAGGCACTCACGGTGAGTTGCTGAATGAAGCAGAAGTAGCTGCGGCTGCAGAAGAGAAAGAAACTCATTCTTTTGAAATCGATCCTTCTCAGGTTGAAAATGTGAAGCAACAATGTCTGCCAAATGCATTGAATTATCCCATGTTGGAGGAGTATGACTTTAGAAATGACACAGTCAACCCTGATCTGGATATGGAACTAAAGCCTCAAGCACAGCCACGGCCATATCAAGAGAAGAGCCTGAGTAAAATGTTTGGAAATGGTAGAGCAAGATCCGGCATCATTGTTCTACCTTGTGGTGCTGGTAAGTCTCTTGTTGGTGTTTCTGCAGCCTGCCGTATAAAAAAGAGCTGCCTTTGTTTGGCAACAAACGCTGTGTCTGTGGACCAGTGGGCTTTTCAGTTTAAGCTATGGTCAACCATCCGAGATGAAAATATCTGCCGTTTCACATCTGATAGCAAAGAGAGGTTCCGTGGTAATGCTGGAGTGGTTGTGACAACATATAATATGGTTGCCTTTGGTGGCAAACGGTCTGAAGAATCTGAGAAGATCATTGAGGAAATTAGAAACAGAGAATGGGGATTGCTTCTCATGGATGAGGTACATGTGGTTCCTGCACATATGTTTCGGAAGGTCATTAGCCTCACTAAATCTCACTGCAAACTTGGGCTCACAGCCACACTTGTGAGAGAGGATGAAAGGATTACAGATCTGAATTTTCTCATTGGTCCCAAGTTGTATGAAGCAAATTGGTTGGATCTAGTCAAAGGCGGGTTTATTGCAAATGTACAGTGTGCTGAAGTATGGTGTCCAATGACAAAAGAATTTTTTGCGGAGTATCTGAAGAAGGAGAATTCCAAGAAGAGACAGGCGCTCTATGTGATGAATCCAAATAAGTTCAGAGCATGCGAGTTTCTCATAAAGTACCACGAAACACAGCGTGGTGATAAAATTATAGTCTTTGCTGATAATCTTTTTGCTCTAACTGAGTATGCCATGAAACTTCGCAAACCAATGATATATGGTGCTACAAGCCATGTTGAGAGGACAAAAATTCTACAGGCATTCAAAACTAGCAAAGATGTCAACACTATATTCCTTTCCAAGGTGGGTGATAACTCAATTGACATTCCAGAAGCAAATGTGATAATTCAGATCTCTTCACATGCTGGTTCAAGGCGTCAAGAAGCCCAACGTCTAGGCCGTATTCTTAGGGCAAAGGGCAAGCTTCAGGATAGGATGGCAGGGGGTAAGGAGGAGTATAATGCATTCTTTTATTCTCTCGTGTCAACAGATACCCAGGAGATGTACTACTCAACCAAGAGGCAGCAATTTTTGATTGATCAGGGTTATAGCTTTAAGGTTATAACAAGCTTACCTCCACCTGGAGAAGAACCTTCATTGAGTTATTATCATCTTGAAGATCAATTGGCGCTTCTTGGAAAGGTCTTGAGCGCTGGTGACGATGCTGTTGGTCTAGAGCAACTTGATGAAGATGCAGATGATATAGCCCTTCACAATGCCCGGCGTTCAGCAGGATCTATGAGTGCCATGTCGGGTGCAAAGGGAATGCTTTACATGGAGTACAGTACTGGGCGTAACAAAGGTCAAGCGCAGGTCAAGGGCAAGCCAAAAGATCCATCCAAGCGACACGTTTTATTTAAAAGACGCTATGGCTCATAG 2313 0.4323 MGHGHGDKVRPSKKFKAAAKFDDSRKGFVDDDDAYMGDDGYDDDGEKEAKAKDFSKLELKKDHANRPLWACGNGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTMLPKEMIKFIQDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDEVISRSRITSESAAGDGFTISKTAGEIEGTHGELLNEAEVAAAAEEKETHSFEIDPSQVENVKQQCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDENICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLIKYHETQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPGEEPSLSYYHLEDQLALLGKVLSAGDDAVGLEQLDEDADDIALHNARRSAGSMSAMSGAKGMLYMEYSTGRNKGQAQVKGKPKDPSKRHVLFKRRYGS 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1600 770 CDD SF2_C_XPB 475 639 - -
Alju09g1600 770 Pfam Type III restriction enzyme, res subunit 282 438 IPR006935 GO:0003677|GO:0005524|GO:0016787
Alju09g1600 770 NCBIfam DNA repair helicase rad25 53 766 IPR001161 GO:0003678|GO:0006289|GO:0006367
Alju09g1600 770 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 511 677 IPR001650 -
Alju09g1600 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 715 IPR027417 -
Alju09g1600 770 SMART ultradead3 279 460 IPR014001 -
Alju09g1600 770 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 294 456 IPR014001 -
Alju09g1600 770 SMART helicmild6 539 617 IPR001650 -
Alju09g1600 770 MobiDBLite consensus disorder prediction 26 47 - -
Alju09g1600 770 MobiDBLite consensus disorder prediction 743 770 - -
Alju09g1600 770 FunFam Probable DNA repair helicase RAD25 273 464 - -
Alju09g1600 770 PRINTS Xeroderma pigmentosum group B protein signature 506 521 - -
Alju09g1600 770 PRINTS Xeroderma pigmentosum group B protein signature 152 171 - -
Alju09g1600 770 PRINTS Xeroderma pigmentosum group B protein signature 66 86 - -
Alju09g1600 770 PRINTS Xeroderma pigmentosum group B protein signature 295 317 - -
Alju09g1600 770 PRINTS Xeroderma pigmentosum group B protein signature 592 617 - -
Alju09g1600 770 PRINTS Xeroderma pigmentosum group B protein signature 264 290 - -
Alju09g1600 770 PRINTS Xeroderma pigmentosum group B protein signature 573 591 - -
Alju09g1600 770 PRINTS Xeroderma pigmentosum group B protein signature 526 548 - -
Alju09g1600 770 PRINTS Xeroderma pigmentosum group B protein signature 468 490 - -
Alju09g1600 770 PRINTS Xeroderma pigmentosum group B protein signature 720 739 - -
Alju09g1600 770 PRINTS Xeroderma pigmentosum group B protein signature 402 422 - -
Alju09g1600 770 PRINTS Xeroderma pigmentosum group B protein signature 629 652 - -
Alju09g1600 770 CDD DEXHc_XPB 275 444 - -
Alju09g1600 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 242 458 IPR027417 -
Alju09g1600 770 PANTHER RAD25/XP-B DNA REPAIR HELICASE 57 739 - -
Alju09g1600 770 FunFam Putative DNA repair helicase rad25 465 707 - -
Alju09g1600 770 Pfam Helicase conserved C-terminal domain 68 191 IPR032830 -
Alju09g1600 770 Pfam ERCC3/RAD25/XPB C-terminal helicase 464 712 IPR032438 -
Alju09g1600 770 Gene3D - 465 705 IPR027417 -
Alju09g1600 770 Gene3D - 273 464 IPR027417 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1600 09 39979777 39986513 Alju09g1600 09 39979777 39986513 ECH