Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1514 ATGAGCTCTCAAGTCTGCAGATCCGCTTCTAGAGCCGTGAGATCTTTTCTCTCTGCTTCCAAGGGCTCTCGCTTTTACTCCGAAGGGAGCACTGTAGCCGCCGCCGCCGCCGTTTCACTCACAAGGAAAGTCCCCCTTTTTGCTTCAAACATTGGGAGGTCTGAATCCGGAAATGGATCCAGAGCATGGCTTTCAGGGGTTCTCGCTCTTCCTGCTGCAGCTTACTTGCTCCAAGACCAAGAGGCACATGCTGCTGAGCTGGAGCGCACTTTCATTGCCATTAAGCCCGATGGAGTCCAAAGAGGGCTGATTTCAGAGATCATATCTCGTTTTGAGAGGAAAGGGTTCAAACTCGTGGGAATTAAAATATTGGTTCCTTCAAAAGATTTTGCACAGAAGCATTATCATGACCTGAAGGAAAGACCCTTCTTCAATGGCCTTTGTGAATTCCTAAGCTCTGGTCCTGTTATTGCCATGGTCTGGGAAGGGCAGGGAGTTATTACCTATGGCCGAAAACTAATCGGGGCCACTGATCCACAGAAATCTGAGCCTGGCACTATCAGAGGCGATTTGGCTGTCGTCGTTGGAAGAAATATCATCCACGGGAGTGATGGACCAGAGACTGCCAAGGACGAAATTAAGTTGTGGTTCAAGCCAGAGGAGTTGGTAAATTACACAAGCAATGCAGAAAAGTGGATTTATGATAAAACGGATCCGCGTCCCCGCCATCTATTAATACCTCACCCCTATCAATCTTTTTATTCCTCAATTATATTTTCCTTTTCTGCGGCTCTTGGTACTGTGCAAAACCCTAGCTTCTTGCTACTCGATCGCATCATCGCTGAGTTTCAGCTTGTCAAGAATGGCAGCTAA 873 0.4754 MSSQVCRSASRAVRSFLSASKGSRFYSEGSTVAAAAAVSLTRKVPLFASNIGRSESGNGSRAWLSGVLALPAAAYLLQDQEAHAAELERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKILVPSKDFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGQGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVNYTSNAEKWIYDKTDPRPRHLLIPHPYQSFYSSIIFSFSAALGTVQNPSFLLLDRIIAEFQLVKNGS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1514 290 Gene3D - 83 240 IPR036850 -
Alju09g1514 290 Hamap Nucleoside diphosphate kinase [ndk]. 87 222 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Alju09g1514 290 SUPERFAMILY Nucleoside diphosphate kinase, NDK 87 235 IPR036850 -
Alju09g1514 290 ProSitePatterns Nucleoside diphosphate kinases active site. 198 206 IPR023005 -
Alju09g1514 290 CDD NDPk_I 88 217 - -
Alju09g1514 290 Pfam Nucleoside diphosphate kinase 88 221 IPR034907 -
Alju09g1514 290 PRINTS Nucleoside diphosphate kinase signature 134 153 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Alju09g1514 290 PRINTS Nucleoside diphosphate kinase signature 90 112 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Alju09g1514 290 PRINTS Nucleoside diphosphate kinase signature 175 191 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Alju09g1514 290 PRINTS Nucleoside diphosphate kinase signature 154 171 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Alju09g1514 290 PRINTS Nucleoside diphosphate kinase signature 198 217 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Alju09g1514 290 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 79 235 - -
Alju09g1514 290 SMART ndk_5 87 224 IPR034907 -
Alju09g1514 290 FunFam Nucleoside diphosphate kinase 83 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1514 Alju-ChrAlju09 39116977 39126371 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1514 09 39116977 39126371 Alju09g1514 09 39116977 39126371 ECH