Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1491 ATGATCTTGGCTATTCTGGCTGAATCAAATCTAGTAGTTTCAGATGATGTTGCAGAAGCAACTGTGGACAAGGGATATAATCATGTCCTTCACCAGTTTTATGTTGAAGACTCAAGTGGAAGACGAAGAGCTCAGATTATAGGCAATGAACATGCCTCAGCCTTTTACAAAATAATGGGATGCACTTGCTCCAAACAACGTCTTGTGCATGAAGATCCAGCAGTTCTTGCTACCCAAACCTGCTTTAACGTATCTGAAATTCAAGGACTTTATGAGTTGTTCAAGGAGCTGAGTAGTTCTGCTGTTGATGAAGGGCTTATCAGCAAAGAAGAGTTTCAGTTATGCTTATTGGGAAGTAGCAAGACACAGAGTCTATTCGCAGACCGGGTTTTTCATTTATTTGACTCTAAAAATGATGGGGTAATAGAATTTGGAGAGTTTGTTCGAGCTCTAAGTGTCTTCCATCCAGCTGCACCACAGGAACAAAAAGCAGCTTTTGCATTTCAAATTTATGATCTATGGCAAACAGGCTTCATTGGACGTGACGAGGTAAAAGAGCTGATATTGGCACTTTTAAGAGAGTCAGATTTGATTCTTTCTGAAGACTTAATTGAGGCCATAATTGATCAGGCGTTTAAAGAAGCAGATTTAAAAGGAGACGGAAAGATCGATCTAGAGGAATGGAATGAATTTGCAGCTCAAAACCCATCCATACTGAAGAATATGACAATTCCATATTTAGAGGATCTTAATACTCAATTTCCTAGGGGATGA 774 0.3941 MILAILAESNLVVSDDVAEATVDKGYNHVLHQFYVEDSSGRRRAQIIGNEHASAFYKIMGCTCSKQRLVHEDPAVLATQTCFNVSEIQGLYELFKELSSSAVDEGLISKEEFQLCLLGSSKTQSLFADRVFHLFDSKNDGVIEFGEFVRALSVFHPAAPQEQKAAFAFQIYDLWQTGFIGRDEVKELILALLRESDLILSEDLIEAIIDQAFKEADLKGDGKIDLEEWNEFAAQNPSILKNMTIPYLEDLNTQFPRG 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1491 257 Pfam EF-hand domain pair 105 150 IPR002048 GO:0005509
Alju09g1491 257 Pfam EF-hand domain pair 162 227 IPR002048 GO:0005509
Alju09g1491 257 FunFam calcineurin B-like protein 3 72 256 - -
Alju09g1491 257 PANTHER CALCINEURIN B 59 255 IPR045198 GO:0005509|GO:0019722|GO:0019900
Alju09g1491 257 CDD EFh 163 233 IPR002048 GO:0005509
Alju09g1491 257 ProSiteProfiles EF-hand calcium-binding domain profile. 159 194 IPR002048 GO:0005509
Alju09g1491 257 SUPERFAMILY EF-hand 74 247 IPR011992 -
Alju09g1491 257 Gene3D - 72 256 - -
Alju09g1491 257 ProSiteProfiles EF-hand calcium-binding domain profile. 122 157 IPR002048 GO:0005509
Alju09g1491 257 SMART efh_1 126 154 IPR002048 GO:0005509
Alju09g1491 257 SMART efh_1 207 235 IPR002048 GO:0005509
Alju09g1491 257 SMART efh_1 163 191 IPR002048 GO:0005509
Alju09g1491 257 ProSiteProfiles EF-hand calcium-binding domain profile. 203 238 IPR002048 GO:0005509
Alju09g1491 257 PRINTS Recoverin family signature 177 195 - -
Alju09g1491 257 PRINTS Recoverin family signature 130 151 - -
Alju09g1491 257 PRINTS Recoverin family signature 223 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1491 Alju-ChrAlju09 38908764 38911821 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1491 80 255 EF-hand Containing Proteins AT5G24270 60.227 8.05e-80 237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1491 09 38908764 38911821 Alju09g1491 09 38908764 38911821 ECH