Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1490 ATGTCCATTTCCCTGAGCTGTTTTTGCTCCAAGAAGATTAGACAAAAGGCAAAGCATGAACAGTACCTCATTCTTTCTTCAGAGACATGGTTCACAGTGAATGAAGTGGAGGCCTTGCTTGACTTGTTTCAAGTCCTAAGCAGTTCAATTGTTGATGATGGCCTTATTCACAAGGAGGAGTTTCGGCTTGCACTTTTCCGAAACAGCAGGAAAGAGAATCTATTTGCAGACAGGGTGTTTGATATGTTTGATACTAAGAGTAATGGAGCAATTAACTTTGAGGAATTTGTCCGGTCACTAAGCATCTTTCATCCAAATGCTCCTACAGAGATGAAGATTGCATTTGCATTTAAATTGTATGATCTTCGGAAGACCGGATACATCGAGCGCGAGGAGTTGAAGAAGATGGTCTTGGCTATTCTGGCTGAATCAGATCTAGAAGTTTCTGATGATGTTGCAGAAGCAATTGTGGACAAGACCTTAAAGGACGCAGACTCAAATGGAGATGGAAAGATCGATGAAGAGGAGTGGAATGAATTTGTGGCAAGGAATCCGTCCCTTTTAAAGATGATGACTCTTTCATGTCTAAAGGATTTAACCATGTCCTTCACCAGTTTCATATTTAAAACGCAAGTTGAAGAAGAAGAGCACGGATTATAG 660 0.4076 MSISLSCFCSKKIRQKAKHEQYLILSSETWFTVNEVEALLDLFQVLSSSIVDDGLIHKEEFRLALFRNSRKENLFADRVFDMFDTKSNGAINFEEFVRSLSIFHPNAPTEMKIAFAFKLYDLRKTGYIEREELKKMVLAILAESDLEVSDDVAEAIVDKTLKDADSNGDGKIDEEEWNEFVARNPSLLKMMTLSCLKDLTMSFTSFIFKTQVEEEEHGL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1490 219 ProSitePatterns EF-hand calcium-binding domain. 165 177 IPR018247 -
Alju09g1490 219 FunFam calcineurin B-like protein 3 21 214 - -
Alju09g1490 219 Pfam EF-hand domain pair 53 98 IPR002048 GO:0005509
Alju09g1490 219 ProSiteProfiles EF-hand calcium-binding domain profile. 71 106 IPR002048 GO:0005509
Alju09g1490 219 SMART efh_1 75 103 IPR002048 GO:0005509
Alju09g1490 219 SMART efh_1 112 140 IPR002048 GO:0005509
Alju09g1490 219 SMART efh_1 156 184 IPR002048 GO:0005509
Alju09g1490 219 CDD EFh 112 182 IPR002048 GO:0005509
Alju09g1490 219 Pfam EF-hand domain pair 111 177 IPR002048 GO:0005509
Alju09g1490 219 PRINTS Recoverin family signature 126 144 - -
Alju09g1490 219 PRINTS Recoverin family signature 79 100 - -
Alju09g1490 219 PRINTS Recoverin family signature 172 192 - -
Alju09g1490 219 Gene3D - 24 215 - -
Alju09g1490 219 ProSiteProfiles EF-hand calcium-binding domain profile. 108 143 IPR002048 GO:0005509
Alju09g1490 219 ProSiteProfiles EF-hand calcium-binding domain profile. 152 187 IPR002048 GO:0005509
Alju09g1490 219 PANTHER CALCINEURIN B 6 214 IPR045198 GO:0005509|GO:0019722|GO:0019900
Alju09g1490 219 SUPERFAMILY EF-hand 26 194 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1490 Alju-ChrAlju09 38901007 38904528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1490 5 214 EF-hand Containing Proteins AT4G17615 56.190 1.69e-86 253
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1490 09 38901007 38904528 Alju09g1490 09 38901007 38904528 ECH