Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1460 ATGGTGGACACTGTCAAGTACCTCATGGGCTCGCCGGGCCCGTCGGGGTTTGGCTCTAGCTCCACCGCCGAACAAGTCACCGACACCACCACCACCTCCTCCTCCCATTTGTCCTCTCTCACCGCGATCATCACCGGCGCAACGTCGGGGATCGGAGCTGAAACGGCGAGGGTTCTCGCGAAGCGAGGAGTGAGGTTGATTCTGCCGGCGAGAACCCTGAAATCCGCCGAAGAAACTAAAGCTCGCATCATCTCTGAGTCTCCGAACTCATACATCATTGTGATGTCTCTCGATCTTAGTTCTCTTAGCTCTGTTCGCTCCTTCGTCTCTCATTTCCATTCCCTCCATTTACCTCTCCACCTTCTCATAAACAACGCCGGGAAGTTCGCCCACCATCATGCCATCTCCGAAGACGGATTTGAGATGTCCTTCGCCACTAATTATTTAGGTCATTTTCTGTTGACGGACTTGTTGTTGGAGACTATGGTGGAAACGGCGGAGAAGTCGGGGATCCAAGGACGGATCGTGAACGTGTCTTCCAACGTACATGGCTGGTTTTCCGGCGACATTATCCGGTATCTAGCTCTTATTACACGCGATAACAGCCATTACGACCCCACACGTGCTTATGCTCTGTCCAAGCTCGCCAACATCTTACACACCAAGCATCTTGCTCTCAAACTCCAGGAAATGGGAGCAAACGTGACTGCGAATTGCGTTCATCCGGGGATTGTGAGGACCAGGCTCACCAGGGAACGTGAAGGCTTACTGACAGATATAGGGTTCTTGCTGACTTCCAAGTTCTTGAAAACCATTCCCCAGGCAGCAGCAACGACATGTTACGTGGCGACGCATCCGAGGCTGCTAAATGTATCCAGCAAGTACTTTGCTGACTGCAACGAAGCTTCCACGTCAAAACTCGCATCCAATTCATCGGAAGCTGCTAGGTTGTGGACAGCTTCTGAGTCCATGATCTCTGACGGCCCCAAATCTCTTGTTGATTTCCTCCACAATTAA 1017 0.5182 MVDTVKYLMGSPGPSGFGSSSTAEQVTDTTTTSSSHLSSLTAIITGATSGIGAETARVLAKRGVRLILPARTLKSAEETKARIISESPNSYIIVMSLDLSSLSSVRSFVSHFHSLHLPLHLLINNAGKFAHHHAISEDGFEMSFATNYLGHFLLTDLLLETMVETAEKSGIQGRIVNVSSNVHGWFSGDIIRYLALITRDNSHYDPTRAYALSKLANILHTKHLALKLQEMGANVTANCVHPGIVRTRLTREREGLLTDIGFLLTSKFLKTIPQAAATTCYVATHPRLLNVSSKYFADCNEASTSKLASNSSEAARLWTASESMISDGPKSLVDFLHN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1460 338 PRINTS Glucose/ribitol dehydrogenase family signature 233 250 IPR002347 -
Alju09g1460 338 PRINTS Glucose/ribitol dehydrogenase family signature 167 183 IPR002347 -
Alju09g1460 338 PRINTS Glucose/ribitol dehydrogenase family signature 210 229 IPR002347 -
Alju09g1460 338 PRINTS Glucose/ribitol dehydrogenase family signature 41 58 IPR002347 -
Alju09g1460 338 PRINTS Glucose/ribitol dehydrogenase family signature 117 128 IPR002347 -
Alju09g1460 338 MobiDBLite consensus disorder prediction 13 32 - -
Alju09g1460 338 MobiDBLite consensus disorder prediction 14 32 - -
Alju09g1460 338 PANTHER RETINOL DEHYDROGENASE 14 325 - -
Alju09g1460 338 Gene3D - 25 327 - -
Alju09g1460 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 302 IPR036291 -
Alju09g1460 338 Pfam short chain dehydrogenase 41 182 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1460 Alju-ChrAlju09 38617134 38618924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1460 17 273 Acyl Lipid Metabolism Gene Families AT1G24360 26.415 2.49e-10 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1460 09 38617134 38618924 Alju09g1460 09 38617134 38618924 ECH