Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1418 ATGGCAGCAACTAGGGTTTTCGGAGCATGTAGCAGAGCATTGATGGCGGCGGCGGTGGCGAAGGGGGCTGCGTCCGGTGTTAAGACTGCTGCGAAGATGGCCACACCAAAAAGAGGCAGCGCCTTACAGAAGATGATACCTGTCTCTCCGCAGCTCGGCAGGTTTCTCGGTGCCTCTGAAGCTTCACGAACCGACGCTGTCAAGAAAGTGTGGGAGCACATCAAACTCCACAACCTTCAGAATCCTGCAAACAAGAAGGAAATTGTTTGCGATGAGAAGTTGAAGACCATTTTTGATGGGAAAGATAAAATATCGTTCACAGAGATTGCCAGATTTCTGTCTAACCATTTTGTGAAATCGGCCTAA 366 0.4945 MAATRVFGACSRALMAAAVAKGAASGVKTAAKMATPKRGSALQKMIPVSPQLGRFLGASEASRTDAVKKVWEHIKLHNLQNPANKKEIVCDEKLKTIFDGKDKISFTEIARFLSNHFVKSA 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1418 121 SMART swib_2 42 121 IPR019835 -
Alju09g1418 121 SUPERFAMILY SWIB/MDM2 domain 36 119 IPR036885 -
Alju09g1418 121 Gene3D SWIB/MDM2 domain 36 121 IPR036885 -
Alju09g1418 121 Pfam SWIB/MDM2 domain 46 117 IPR003121 -
Alju09g1418 121 CDD SWIB-MDM2_like 47 117 - -
Alju09g1418 121 ProSiteProfiles SWIB/MDM2 domain profile. 41 119 IPR003121 -
Alju09g1418 121 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 27 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1418 Alju-ChrAlju09 38238930 38240562 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Alju09g1418 SWIB 2e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1418 09 38238930 38240562 Alju09g1418 09 38238930 38240562 ECH