Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1410 ATGGCGAGTGATTCTGGCGCGAAACCTGCCCCTGCTTCTTCGTCCTCAACTGCAGAGGAATCCTACATTGGGAGCTTTATCAGTCTGATTTCCAAGTACGAGATTCGTTACGAAGGCGTTTTGTATCACCTCGACGTCCGTGATTCCACCATTGGCTTGAAGAGCGTCAGATCTTATGGGACAGAGGGGAGAAGAAAAGATGGTCCACAGATTCCTCCAAGTGACAAGGTTTATGAATACATTCTTTTTCGAGGGAGTGACATTAAGGATTTGCAGGTCAAGTCCCTTCCTACATCTACCAAAGAAGAGCAGATATTCAGTGATCCAGCTATCATCCAGTCACAATATTCTGAAGTGCCTTCAAGGTCTCCTACGGCTTCAGTGGGTGGGATCAGTTTGACAGAATCAATTCAAAAGCTAGATACTCCTGCTATGATCAGTAGGGACATTCCTCGTTCCGTTGGGTTGCCTTCTCATCAATCTACAACGTTGACTGGCTTATCAGCTCAATCTGCTGCTACTCATGTTTCTGGTGCCCCTTCTTTCTCTACAATAATGTATTGGCCAGATTATAGTGGGATATCAGGAAGCAGCTCTCATTCTCTGCTGCATTCTAGTCCTTTTCAGTCCCCTTCAGGAGTGGCACCTTTAAATACACAGAGCTGGACCCAAACTCCAGAAAGTCAGTCACCTTCTTCAAAAGTGGGCTGGACTACTTTACCAGAGCGTGGTGAACCTGTCTCATCTGTTACTGCTCGATCTCTTGTAAATCCGTCTTATGAACTTTCATCTTCCTCTTTACAAACTTCGGATTCTCTAGATGCTCCATCACTTCTGTCTTTGAATACATCGTTGCCCTATCATTCTTCTTTGGCTGAATCAAACATGCCTTCATTTTCTTCACCGTTTCAAGGCATAAATTCTGTCAAAGATCAATTTCCTGGTCAAATTTCTCCCTACATGGGATCCATGTTTCCTGGACAATTTGCCCATCATTCTGTTTCTCCTTCGATTGATTCTACTTCAGGCTCCTCGCCAAGACCTCCATCTTTTTTAACTCCAGATCAGTTTGCTCCTTCGAGACAGGATTTTGTATATTTAGTGCAGAACCAGATCCCTGATCAGAATCATATGGGTTCTCTGGCACCAACATCCTCTAGCTCCACTTTTGTAGTACCTTCTCCAGAATTTCAAGCACCATTGTTGCCTTCACCACCATTGCCAACATCAGTGCGCAAGCCTCAGCACTCAGCTTCACAGTTCAGTGAAGAGTTTGATTTTGAGGCCATGAACGAGAAGTTCAAAAAGAATGAAGTATGGGGTTCTCTTGGGAGGCCATCTAAGACAATAGAAGGATTGGAGGATAATGCTCCAACTGACGGCTTGGGTGACACACAGTGTCATGTGTTTCAACCTAACCCAAACACTAAGCCTGCATATAAGAAAGATGACTTTTTTGACACAATTTCGTGTAACTCTCTCGGTCATTGGTCAAGGAATGGACAGAACCGCCTATCTGAGAGAATGAAGCTGGATTCTGAGACGTTTGGCTATTTTCCTCGGAGTCCTACAATGGGTTATGCTGCCTATGGCGGTGGACGTGGTGAAAATTACCGGAGCTCATACAATATGGGAAGGGGTTATAGCTATTATGGTGGAAGAGGGCGTGGCAGGAATATGCCTTTCTATTAG 1692 0.4468 MASDSGAKPAPASSSSTAEESYIGSFISLISKYEIRYEGVLYHLDVRDSTIGLKSVRSYGTEGRRKDGPQIPPSDKVYEYILFRGSDIKDLQVKSLPTSTKEEQIFSDPAIIQSQYSEVPSRSPTASVGGISLTESIQKLDTPAMISRDIPRSVGLPSHQSTTLTGLSAQSAATHVSGAPSFSTIMYWPDYSGISGSSSHSLLHSSPFQSPSGVAPLNTQSWTQTPESQSPSSKVGWTTLPERGEPVSSVTARSLVNPSYELSSSSLQTSDSLDAPSLLSLNTSLPYHSSLAESNMPSFSSPFQGINSVKDQFPGQISPYMGSMFPGQFAHHSVSPSIDSTSGSSPRPPSFLTPDQFAPSRQDFVYLVQNQIPDQNHMGSLAPTSSSSTFVVPSPEFQAPLLPSPPLPTSVRKPQHSASQFSEEFDFEAMNEKFKKNEVWGSLGRPSKTIEGLEDNAPTDGLGDTQCHVFQPNPNTKPAYKKDDFFDTISCNSLGHWSRNGQNRLSERMKLDSETFGYFPRSPTMGYAAYGGGRGENYRSSYNMGRGYSYYGGRGRGRNMPFY 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1410 563 SMART FDF_2 419 520 IPR019050 -
Alju09g1410 563 ProSiteProfiles DFDF domain profile. 413 449 IPR025762 -
Alju09g1410 563 PANTHER SCD6 PROTEIN-RELATED 19 559 - -
Alju09g1410 563 MobiDBLite consensus disorder prediction 331 351 - -
Alju09g1410 563 MobiDBLite consensus disorder prediction 202 237 - -
Alju09g1410 563 CDD LSm14_N 22 93 IPR025609 -
Alju09g1410 563 Gene3D - 12 97 - -
Alju09g1410 563 SUPERFAMILY Sm-like ribonucleoproteins 21 95 IPR010920 -
Alju09g1410 563 SMART LSM14_2 16 116 IPR025609 -
Alju09g1410 563 ProSiteProfiles FFD box profile. 478 493 IPR025761 -
Alju09g1410 563 MobiDBLite consensus disorder prediction 333 351 - -
Alju09g1410 563 FunFam Trailer hitch, isoform C 15 99 - -
Alju09g1410 563 Pfam FDF domain 420 517 IPR019050 -
Alju09g1410 563 MobiDBLite consensus disorder prediction 202 252 - -
Alju09g1410 563 Pfam Scd6-like Sm domain 22 95 IPR025609 -
Alju09g1410 563 ProSiteProfiles Sm domain profile. 14 97 IPR047575 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1410 Alju-ChrAlju09 38049140 38054034 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1410 09 38049140 38054034 Alju09g1410 09 38049140 38054034 ECH