Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1383 ATGCATCAAGAGCAGCTGGGCCCGGGGTCCTATCGAAGGAGCCTATCAAGAAGGCGCTCCTTAAGGTCTGGGGCAGATACGGATGATAGGGGGTGGACCTCACTTCATGTTTGCGCTCGCAAAGGAGATCTCAAATTGGTTAAAAAGCTTATTGATGAAGGAATGGATGTAAATGTTATTGCATGGGGTCCAAAATCAAAAGGTGTGACCCCACTTCATCTTGCTGCTGAAGGTGGCCATCTTGAAGTCATGGATGAATTACTTGAGCGTGGTGCTGACATTGATGCTAGGACTAAGGGTGCTTGTGGATGGACACCTCTCCACATTGCAGCTAAAGAAAGGAGGAGGGCAGCGGTGAAATTCTTGGTAGAGAATGGATCATTCTTGCCTCCTGATATCAATGATTGCAGATTTAATCCCCCAGTTCATTATTGCCATGGACTTGAATGGGCCTACGAGGAAATGAAGCGACTTCGATATGAAAACTCATCAACATCTGAGGAGACCTCTTGCAGCTCAGAAAGCTGA 528 0.4697 MHQEQLGPGSYRRSLSRRRSLRSGADTDDRGWTSLHVCARKGDLKLVKKLIDEGMDVNVIAWGPKSKGVTPLHLAAEGGHLEVMDELLERGADIDARTKGACGWTPLHIAAKERRRAAVKFLVENGSFLPPDINDCRFNPPVHYCHGLEWAYEEMKRLRYENSSTSEETSCSSES 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1383 175 ProSiteProfiles Ankyrin repeat profile. 102 127 IPR002110 GO:0005515
Alju09g1383 175 Pfam Ankyrin repeat 102 126 IPR002110 GO:0005515
Alju09g1383 175 SMART ANK_2a 102 135 IPR002110 GO:0005515
Alju09g1383 175 SMART ANK_2a 67 96 IPR002110 GO:0005515
Alju09g1383 175 SMART ANK_2a 30 59 IPR002110 GO:0005515
Alju09g1383 175 SUPERFAMILY Ankyrin repeat 27 145 IPR036770 -
Alju09g1383 175 Gene3D - 63 169 IPR036770 -
Alju09g1383 175 ProSiteProfiles Ankyrin repeat region circular profile. 102 127 - -
Alju09g1383 175 ProSiteProfiles Ankyrin repeat region circular profile. 30 59 - -
Alju09g1383 175 MobiDBLite consensus disorder prediction 1 29 - -
Alju09g1383 175 Gene3D - 12 62 IPR036770 -
Alju09g1383 175 ProSiteProfiles Ankyrin repeat profile. 67 99 IPR002110 GO:0005515
Alju09g1383 175 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 27 145 - -
Alju09g1383 175 Pfam Ankyrin repeats (3 copies) 23 97 IPR002110 GO:0005515
Alju09g1383 175 ProSiteProfiles Ankyrin repeat profile. 30 62 IPR002110 GO:0005515
Alju09g1383 175 PRINTS Ankyrin repeat signature 83 97 IPR002110 GO:0005515
Alju09g1383 175 PRINTS Ankyrin repeat signature 31 46 IPR002110 GO:0005515
Alju09g1383 175 ProSiteProfiles Ankyrin repeat region circular profile. 67 99 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1383 34 157 Acyl Lipid Metabolism Gene Families AT5G53470 33.871 1.61e-12 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1383 09 37717423 37719069 Alju09g1383 09 37717423 37719069 ECH