Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1301 ATGTCGATAAAAACTGTTAAAGTCAGTAATCTTTCTCTGGGAGCAACTGAACAAGACATTAAGGAGTTTTTTTCTTTTTCTGGTGATATTGAATATGTTGAAATGAGGAGTCATGATGAACGATCTCAAATTGCTTTTGTCACTTTCAAGGATGCGCAAGGAGCTGAAACTGCTGCACTACTATCGGGAGCAACGATAGTTGATTTGTCAGTTACAATAACTTTGGACCCAGATTACCAGCTTCCACCAGCTGCTTTTACATCACCTGTAACCGAAAGTAAGACTCCAGGTGGTGCTGAATCTTCTTTAAGAAAGGCAGAGGATGTGGTCACCGGCATGCTGTCGAGGGGCTTTGTCTTGGGGAAAGATGCTGTCAACAAAGCAAAGACATTCGATGAGAAGCATCAGTTATCATCAACTGCCTCAGCAAAAGTTGCTTCTTTTGATCAGAAAATTGGTTTCAGTGAGAAAATAACTGCTGGCGCTTCAGCCATGAGTGGTCGAGTTCGAGAAGTGGATCAAAAGTTTCAGGTTTCTGAAAAAACCAAAACGGCATTTGCAGCCGCAGAACAGAAAGTCAATGAAGCAGGTTCTGCTATCATGAAAAATCGCTATATACTCACTGGGGCTTCATGGGTAACAGGTGCTTTCAGCAAGGTTGTTAAGGCAGCTGAAGATGTAGGACAGAAGACAAAGGAGAAAGTGCACAATACAGAAGAGGAACGGAAGCAAAAGGATCAGCATGCCCAGAACCCCTCTGAGCCACCAAAAGCAGCACCGACAACAGGTGAACAGAACCCATCTAAGCCTTCTCCTCCTGAGGGTTTGATCCTTTAA 837 0.4361 MSIKTVKVSNLSLGATEQDIKEFFSFSGDIEYVEMRSHDERSQIAFVTFKDAQGAETAALLSGATIVDLSVTITLDPDYQLPPAAFTSPVTESKTPGGAESSLRKAEDVVTGMLSRGFVLGKDAVNKAKTFDEKHQLSSTASAKVASFDQKIGFSEKITAGASAMSGRVREVDQKFQVSEKTKTAFAAAEQKVNEAGSAIMKNRYILTGASWVTGAFSKVVKAAEDVGQKTKEKVHNTEEERKQKDQHAQNPSEPPKAAPTTGEQNPSKPSPPEGLIL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1301 278 MobiDBLite consensus disorder prediction 254 269 - -
Alju09g1301 278 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 240 - -
Alju09g1301 278 MobiDBLite consensus disorder prediction 85 104 - -
Alju09g1301 278 MobiDBLite consensus disorder prediction 226 278 - -
Alju09g1301 278 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 7 65 IPR000504 GO:0003723
Alju09g1301 278 SMART rrm1_1 5 74 IPR000504 GO:0003723
Alju09g1301 278 MobiDBLite consensus disorder prediction 226 250 - -
Alju09g1301 278 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Alju09g1301 278 Gene3D - 2 74 IPR012677 -
Alju09g1301 278 FunFam RNA recognition motif-containing protein 1 74 - -
Alju09g1301 278 SUPERFAMILY RNA-binding domain, RBD 4 82 IPR035979 GO:0003676
Alju09g1301 278 Coils Coil 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1301 Alju-ChrAlju09 36679363 36682714 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1301 09 36679363 36682714 Alju09g1301 09 36679363 36682714 ECH