Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1265 ATGGAGATCCATCCTCCTGAAATCCTCCAATCTAGGTTTTCTGATTCAGTTCTTGGCGGAGTACCCTTGGTCGGCGCTTCAACGATTTCAGAAATTCCGGTTTCGGTGGGAGCTCCAATTGGGTCTCCATCGTCTTCGCATTCTGGGAGCGTTGATGACCGTTCTTTGGTTCCTTACGTACCAAATCAGATGGGAGTTTCAGCGTCTTTATCCAGTGAAGCCGAAGAGGAGCGGATCAATGCGTCTTTACCATCCAATATAAGTGTTTCTCATCCTTATTTAGGTTCCAAAACCCTAGACGAGTGTTCACCTTCAGCATCAATAGAAATCTCAGCGCCTTTGGTGCCTCAGTCATCAACTCTCTTAAGGTCGTCACTGCCCATGGCAACGGCTGCCGAGAATAATTATTACCTCCCATTCTGTGATTCTGGTAGGGAAGATCGAGATGATGTTCCAGAGCCAATTCGATCGGTGAACAATTTATCATATTATCCGGCTGTATCATCTCCCAAGCATTGGGCTTCGTGGCCCTCTTCTTCACAGCTTCCCTCTAAAGAAACTTGGAATCCCGAGCTTACTTCCGATCAAATATTGGTTCCATCTGAACATGCTGGCACAACTTTGAACAATGTGTTTAATGTTTCCGAAATTGTATCCTTCACGGTGGGTGCTGGGCTTGAAAATCTTGGAAACACATGCTTTTTCAATGTTATCTTGCAATGCCTTACACATACTGTGCCTCTAATTCGGGGTCTTTATACTTGCAGTCATAGTTCACCTTGTGAAAGTGGTATTGATGGATTCTGTGTTCTTTGTGTTCTTCGTGATCACATTGAACTTTCGTTGAAGTCTGCTGGAAGAATTCTCTCACCTTTGAAACTTGTTGAGAATTTGAATTATTTTTCTTCTTTTTTCACAAGATACCAGCAGGAAGATGCCCATGAATTCCTGCAGTGCTTCTTAGACAAACTGGAAAGATGCTTTCTAGATTTAAAGAGAAATAGCCAGAATTGTGAACAAGTTGACAATCTAGTGGAAAAAATATTTGGCGGTCGCCTTATCAGCAAACTTCAATGTTGTAATTGTGGTCACTGTTCAGACACATATGAGCCTCTCATTGACTTTAGCTTGGAGATAGATAATGTGGACAGCCTTCCAAGTGCTTTAGCATCATTCACTAAGGTAGAACAGATAGATGCTAAGATTACATGTGATAGCTGCAAGGAAGAAGTATCCATGGAGAAGAGGCTTATTTTGGATCAGACACCTTCAGTTGCAGCATTTCATTTAAAGAGATTTAAGGCAGATGGGATATATGTTGAAAAGATTGATAATCATGTGGATTTCCCTCTAGAATTGGACTTACAGCCTTATACCAATTGTAATGAAGCACTGAAGTATGACCTGTATGCCATTGTTGTCCATGTTGGGTTTTCATCTACTTCTGGGCATTACTTTTGCTTTGTCCGCACTGCACCTGACATGTGGTATAGGTTAGATGACTCCAAGGTTACTAGAGTTGCAAGAGATTTTGTGCTGTCTCAGGAAGCATACATATTACTCTATGCTCGACAGGGCACACCATGGCTATCTTCTATAATGGATGCTTCAAGTCCATGTTTGGCCCCAAGTGTCCTTAATACTTCTCCGAAGTCAGTTTTAGACAATGTTGATGGCTCGTATCGCCCTAATCCTAGTGAGGCAGATTTGGCAAGTGGTGGTGCAAATGAATGCCATGGAGTTTCTCAGCAGACGCCTGTTCATGCTAGTGGAGGATTTAATGAAATACTCAACAATTATATGGATTCTTATTTTGAAGCTGATCAAGTTCACTTTGAGATAAATCCAACTAGTGTTAGTTCTAACGGCACTAAAGAAGAAACCGCCCATGTCCAAGTGCCATGCAATGAGAGAAATGGTTCCCTGTCCTCACTTAATGAAAAAGGTCATGAGGAGACTGTTGATATTAGAGAGAATGATGTTTTCCGCCCCTTAACTCCACCAAGCTCCCCAGGTCCTCAGTCTAATTCTCCAGATGTTGCTTGCCACATTCCTCGGGATCATTTGAAGATGGAGAATCGTGAGAGGTGTCAAAGACCATTAAACAAGACAGTTGATGATTCTGAGAGGAAAGAAGCTATGAGATATCTTAGCAAGAATGTGCATAGTTCGAGGAGATCAAAACTGCTGGGTGCAATGGCTGCTGGGCCCTCCCATGAAAGTTATTCTATCAAAAAGAGGAAGAAATTGGGTTCTCTATGTAAGAAATCCATACCTCCTGGTGACCGTAAGAAATCAAATCATGGCTCTGTCATGTGTGCTTCAAGGTAA 2331 0.4226 MEIHPPEILQSRFSDSVLGGVPLVGASTISEIPVSVGAPIGSPSSSHSGSVDDRSLVPYVPNQMGVSASLSSEAEEERINASLPSNISVSHPYLGSKTLDECSPSASIEISAPLVPQSSTLLRSSLPMATAAENNYYLPFCDSGREDRDDVPEPIRSVNNLSYYPAVSSPKHWASWPSSSQLPSKETWNPELTSDQILVPSEHAGTTLNNVFNVSEIVSFTVGAGLENLGNTCFFNVILQCLTHTVPLIRGLYTCSHSSPCESGIDGFCVLCVLRDHIELSLKSAGRILSPLKLVENLNYFSSFFTRYQQEDAHEFLQCFLDKLERCFLDLKRNSQNCEQVDNLVEKIFGGRLISKLQCCNCGHCSDTYEPLIDFSLEIDNVDSLPSALASFTKVEQIDAKITCDSCKEEVSMEKRLILDQTPSVAAFHLKRFKADGIYVEKIDNHVDFPLELDLQPYTNCNEALKYDLYAIVVHVGFSSTSGHYFCFVRTAPDMWYRLDDSKVTRVARDFVLSQEAYILLYARQGTPWLSSIMDASSPCLAPSVLNTSPKSVLDNVDGSYRPNPSEADLASGGANECHGVSQQTPVHASGGFNEILNNYMDSYFEADQVHFEINPTSVSSNGTKEETAHVQVPCNERNGSLSSLNEKGHEETVDIRENDVFRPLTPPSSPGPQSNSPDVACHIPRDHLKMENRERCQRPLNKTVDDSERKEAMRYLSKNVHSSRRSKLLGAMAAGPSHESYSIKKRKKLGSLCKKSIPPGDRKKSNHGSVMCASR 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1265 776 MobiDBLite consensus disorder prediction 637 682 - -
Alju09g1265 776 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 467 485 IPR018200 GO:0004843|GO:0006511
Alju09g1265 776 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 225 240 IPR018200 GO:0004843|GO:0006511
Alju09g1265 776 Pfam Ubiquitin carboxyl-terminal hydrolase 225 522 IPR001394 GO:0004843|GO:0016579
Alju09g1265 776 MobiDBLite consensus disorder prediction 644 659 - -
Alju09g1265 776 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 141 525 - -
Alju09g1265 776 FunFam Ubiquitin carboxyl-terminal hydrolase 20 220 528 - -
Alju09g1265 776 Gene3D Cysteine proteinases 221 529 - -
Alju09g1265 776 SUPERFAMILY Cysteine proteinases 223 524 IPR038765 -
Alju09g1265 776 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 224 525 IPR028889 -
Alju09g1265 776 MobiDBLite consensus disorder prediction 733 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1265 Alju-ChrAlju09 36245386 36249366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1265 225 555 Miscellaneous Gene Families AT4G31670 35.088 1.29e-50 186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1265 09 36245386 36249366 Alju09g1265 09 36245386 36249366 ECH