Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1094 ATGAAGAGAAACACAAGCAATTCTCTGCTCTTTTTCATCTTCTTACTGATTCTTGTCTTCTTGACCTCTTGTCTCATTTCTGTGGAAGCAAGGAAGAGTCACAACAGGGAAAGAAAACCTCGTAAACATCATGGCCATGGCCATTCTCAAAGTCCTGCCCCATCTCCAGCTCAAACTCAAACCTTCACTTTTGATGTTCTGTCCTTTGGAGCTAAGGCCAATGAGATTTCTGATGATTCCAAGGCGCTTTTAGCAGCATGGAAAGCTGCCTGCAAAGTTGGTGGTACAGTGAAAATTCCAGCAGAACACAGATTCCTAATCAAGCCCATTATTTTACAAGGCCCTTGTATGCCTCACCTTACTCTTCAGATAGATGGGACCCTAATGGCTCCTCCTGCAATATCTTCCTGGCCAAAATCCAGTTTATTTCAATGGATAAATTTCAAAAACATCCACAGCTTCACCATCCAAGGTTCTGGCACCATTGATGGCCAAGGCTTTAACTGGTGGGCCTCCTCACAGATTTATCCTATGCAGGGATATTATTCTGAACAGATTCCAGGCATGAAGCCTACTGCTGTAAGGTTTTATTCTAGCAATGATGTAACAGTTCGTGATATCAAAGTCATAAACAGTCCTCTGTGTCATCTAAAGTTCGACAATTCAAAAGGGATCAAAGTGAATAACATTACAATATCTTCCCCAGAAAATAGCCAAAACACTGATGGTATTCACTTACAGAACTCACAGGATGCAGAGATCCAACATTCCAACATTGCAAGTGGAGATGACTGTGTTTCCATCCAAACTGGCTGCTCAAATATTCATATTCACCATATTAACTGTGGCCCAGGACATGGTATAAGCATAGGAGGATTAGGAAAAGACAGAAGTGTGGCATGTGTTTCCAACATCATGGTTAATGATGTCTCAATGCAAAACACACTATATGGAGTAAGGATCAAAACATGGCAGGGTGGTATTGGGATGGTAAAGAATGTGTCATTCACAAGAGTCCAAGTGGAAGATGTGAAGAGTCCAATAATGGTGGACCAATACTACTGTGACAAGCAAGCATGCAAGAACCAGACAGGAACAGTGGTGATTTCTGGAGTGAAGTTTGATAAAATTTATGGGACTTATGCATTTCAACCAATACACATAGCTTGTAGCAATTCAATACCTTGCACTGACCTTGATCTAACAGATATTCAGCTTAGGCCATCACAGAAGTACAGTGGTTTTCTTCAACAAGCTTTGTGTTGGAACTCTTATGGGAAATCTCAAGGCCCCATGATGCCTTCAAACATTTATTATTGCTTGAGAAGTGGTGGGGGTTATATCAAGAAGATAGCTAGGTCTCATGACAGTGTGTGTTACTAA 1383 0.4121 MKRNTSNSLLFFIFLLILVFLTSCLISVEARKSHNRERKPRKHHGHGHSQSPAPSPAQTQTFTFDVLSFGAKANEISDDSKALLAAWKAACKVGGTVKIPAEHRFLIKPIILQGPCMPHLTLQIDGTLMAPPAISSWPKSSLFQWINFKNIHSFTIQGSGTIDGQGFNWWASSQIYPMQGYYSEQIPGMKPTAVRFYSSNDVTVRDIKVINSPLCHLKFDNSKGIKVNNITISSPENSQNTDGIHLQNSQDAEIQHSNIASGDDCVSIQTGCSNIHIHHINCGPGHGISIGGLGKDRSVACVSNIMVNDVSMQNTLYGVRIKTWQGGIGMVKNVSFTRVQVEDVKSPIMVDQYYCDKQACKNQTGTVVISGVKFDKIYGTYAFQPIHIACSNSIPCTDLDLTDIQLRPSQKYSGFLQQALCWNSYGKSQGPMMPSNIYYCLRSGGGYIKKIARSHDSVCY 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1094 460 SMART pbh1 272 292 IPR006626 -
Alju09g1094 460 SMART pbh1 331 352 IPR006626 -
Alju09g1094 460 SMART pbh1 302 323 IPR006626 -
Alju09g1094 460 SMART pbh1 249 270 IPR006626 -
Alju09g1094 460 SMART pbh1 222 248 IPR006626 -
Alju09g1094 460 MobiDBLite consensus disorder prediction 33 58 - -
Alju09g1094 460 SUPERFAMILY Pectin lyase-like 54 438 IPR011050 -
Alju09g1094 460 Pfam Glycosyl hydrolases family 28 96 412 IPR000743 GO:0004650|GO:0005975
Alju09g1094 460 Gene3D - 48 443 IPR012334 -
Alju09g1094 460 PANTHER - 60 427 - -
Alju09g1094 460 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Alju09g1094 460 FunFam polygalacturonase At1g48100 52 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1094 Alju-ChrAlju09 33721012 33724265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1094 1 459 Glycoside Hydrolase AT3G26610 61.064 0.0 588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1094 09 33721012 33724265 Alju09g1094 09 33721012 33724265 ECH