Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1084 ATGGCGCGCAAGAAGATCAGAGAGTACGACTCCAAGAGATTGTTGAAGGAGCATTTTAAGAGACTCTCTGGCCGTGAGTTACCTGTTAAGTCTGCACAAGTTACAGAGTCTACTGATTTTAATGAGCTAGTGGAGAAGGAGCCCTGGCTTTCAACTTCTAAATTGGTTGTGAAACCTGACATGTTATTTGGAAAGCGTGGTAAAAGCGGTTTGGTTGCCTTAAATCTGGATTTGGCACAAGTTGCTTCTTTTGTGAAAGAGCGTCTTGGCAAAGAGGTTGAGATGAGTGGATGCAAAGGACCAATAACAACCTTCATTGTTGAACCTTTCATCCCACACAATGAAGAGTTCTACCTTAACATTGTCTCAGAGAGACTTGGGGACAGTATAAGCTTTTCAGAATGCGGAGGAATTGAAATTGAAGAGAACTGGGATAAGGTTAAGACAGTATTTGTTCCAACAGGAGTGCCTCTCACATCTGAAATTATTGCTCCACTTGTTGCAACCCTTCCCTTGGAGACCAGGGGAGAAATTGAGGAATTCCTCAAGGTGGTTTTTGCTCTATTTCAAGATCTGGATTTCACTTTCCTAGAAATGAACCCTTTCACATTGGTCAATGGAAAGCCTTATCCTTTGGATATGAGAGGCGAGCTAGATGACACTGCTGCTTTCAAGAACTTCAAAAAATGGGGAAACATTGAATTTCCAATGCCATTTGGAAGGGTTATGAATCCCACAGAGAGTTTCATTCATGGACTAGATGAAAAGACTAGTGCATCTTTGAAGTTTACAGTGTTGAACCCAGCAGGCCGAATCTGGACAATGGTAGCTGGGGGAGGTGCTAGTGTCATCTATGCCGACACAGTTGGAGATCTTGGATATGCATCTGAGCTTGGAAACTACGCAGAATACAGTGGCGCACCTAAAGAAGAGGAGGTCTTGCAATATGCCAGAGTTGTGATTGATTGTGCAACTACTAACCCTGATGGCCAAAAGAGAGCACTTGTGATTGGAGGAGGGATAGCAAACTTCACTGATGTTTCTGCTACATTTAGCGGCATAATTCGAGCACTTAAGGAGAAGGAGGAACAGCTAAAAGCAGCAAGGATGCACATATACGTGAGGAGAGGAGGTCCCAACTATCAAAAAGGTCTAGCGAAAATGCGGGCGCTCGGAGAAAGCATCGGCATCCCTATTCAGGTTTATGGACCAGAAGAAACCATGACTGGTATTTGCAAACAGGCAATCCAATGCATCACTGTAGCTGCTTAA 1272 0.4379 MARKKIREYDSKRLLKEHFKRLSGRELPVKSAQVTESTDFNELVEKEPWLSTSKLVVKPDMLFGKRGKSGLVALNLDLAQVASFVKERLGKEVEMSGCKGPITTFIVEPFIPHNEEFYLNIVSERLGDSISFSECGGIEIEENWDKVKTVFVPTGVPLTSEIIAPLVATLPLETRGEIEEFLKVVFALFQDLDFTFLEMNPFTLVNGKPYPLDMRGELDDTAAFKNFKKWGNIEFPMPFGRVMNPTESFIHGLDEKTSASLKFTVLNPAGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPKEEEVLQYARVVIDCATTNPDGQKRALVIGGGIANFTDVSATFSGIIRALKEKEEQLKAARMHIYVRRGGPNYQKGLAKMRALGESIGIPIQVYGPEETMTGICKQAIQCITVAA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1084 423 PANTHER SUCCINYL-COA SYNTHETASE BETA CHAIN 5 389 IPR005809 GO:0006099
Alju09g1084 423 Pfam ATP citrate lyase citrate-binding 241 417 IPR032263 -
Alju09g1084 423 Gene3D - 240 423 IPR016102 -
Alju09g1084 423 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
Alju09g1084 423 Pfam ATP-grasp domain 6 203 IPR013650 -
Alju09g1084 423 SUPERFAMILY Succinyl-CoA synthetase domains 257 407 IPR016102 -
Alju09g1084 423 Gene3D - 1 233 - -
Alju09g1084 423 FunFam ATP-citrate synthase alpha chain protein 240 422 - -
Alju09g1084 423 FunFam ATP-citrate synthase alpha chain protein 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1084 Alju-ChrAlju09 33473897 33477548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1084 1 423 Acyl Lipid Metabolism Gene Families AT1G10670 86.998 0.0 778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1084 09 33473897 33477548 Alju09g1084 09 33473897 33477548 ECH