Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1078 ATGTTGGGGAGCAACAACGGAAATACCGTTCTTCCTGTTTTCCTGGATGATGCTCACATGCATTATCAAACTAATGCAGCAAATCAACTCCAGTTGTTTGGAAACTTACCAGCCGGGTGTAGTGTTGATCCGGTTAATTACTTTGGAAATGAGCATATTAGTTCTATGGTTCAGCCAAGCAGACAAACCAGGGAAATAGATGACATGTCCAAGCAGCAAAGGCTTCAGATCTCCTTAAATTACAACTTCTGTCAAGATGAACCTGATCGATCAGCAAGCATTCCAAACCCAAACCCAAATCCAAATCCCAACCATGTGTCAACAGGATTGAGGTTGTCTTATGATGACGATGAGCATAACTCATCGGTCACTTCTGCAAGTGGAAGCATGACCGGTACACCTCCAATCATATTATCCCTTGGTGACAATATTAGAACTGAGCTTAATAGGCAGAAGCAAGAATTGGATCAGTATATAAAACTTCAGAAGGAGCAATTGTCAAAAGGATTGAGAGACATGAAACAAAAGCACATGGCGTCTCTTCTTACTGCCATTGACAAAGGCGTAAGCAAGAAGCTAAGGGAAAAAGAAGTGGAGATAGAGAACATGAACCGAAAAAACCGAGAACTAGCGGAGAAAATAAAGCAGGTGGCTTTGGAAGCACAAAACTGGCATTACAGAGCAAAGTACAACGAGTCGGTTGTGAATGTTCTGAGGAACAATCTCCAGCAGGCTATCTCGCAGGGAGTTGAACAAGGGAAGGAAGGGTTTGGGGACAGTGAGGTTGATGATGCCGCCTCAACCATTGACCCCAATAACTTGCTGAGCAACCATGGCGTGACGATGAAATCCGCCGGGAAGAAGCAGCAATGCTCGGAGGAACATATGTTTTGCAGGGCGTGCAAGGTGAAGGAGGTTTCAATGTTGTTAATGCCTTGTAGGCACTTGTGCTTGTGTATGGACTGTGATGCTTTTCTCAATGTTTGTCCTGTATGCCAAATGATGAAATCTGCTAGTGTCCAAGTGTTTCTTTCTTAA 1038 0.4374 MLGSNNGNTVLPVFLDDAHMHYQTNAANQLQLFGNLPAGCSVDPVNYFGNEHISSMVQPSRQTREIDDMSKQQRLQISLNYNFCQDEPDRSASIPNPNPNPNPNHVSTGLRLSYDDDEHNSSVTSASGSMTGTPPIILSLGDNIRTELNRQKQELDQYIKLQKEQLSKGLRDMKQKHMASLLTAIDKGVSKKLREKEVEIENMNRKNRELAEKIKQVALEAQNWHYRAKYNESVVNVLRNNLQQAISQGVEQGKEGFGDSEVDDAASTIDPNNLLSNHGVTMKSAGKKQQCSEEHMFCRACKVKEVSMLLMPCRHLCLCMDCDAFLNVCPVCQMMKSASVQVFLS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1078 345 Coils Coil 193 220 - -
Alju09g1078 345 CDD mRING-HC-C3HC5_CGRF1-like 297 332 - -
Alju09g1078 345 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 279 344 - -
Alju09g1078 345 Coils Coil 145 165 - -
Alju09g1078 345 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 64 342 IPR017066 -
Alju09g1078 345 PIRSF SBP1_RNase_bind 1 345 IPR017066 -
Alju09g1078 345 ProSiteProfiles Zinc finger RING-type profile. 298 333 IPR001841 -
Alju09g1078 345 MobiDBLite consensus disorder prediction 86 134 - -
Alju09g1078 345 Pfam Zinc finger, C3HC4 type (RING finger) 296 334 - -
Alju09g1078 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 345 IPR013083 -
Alju09g1078 345 MobiDBLite consensus disorder prediction 119 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1078 Alju-ChrAlju09 33361861 33365926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1078 297 345 Miscellaneous Gene Families AT2G21380 34.694 3.17e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1078 09 33361861 33365926 Alju09g1078 09 33361861 33365926 ECH