Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1072 ATGCAGATCTCTCTCAAGCTTTTTCTTCAGAGGGATCCAAAGGCTGAAGGAGAAATGGGGTTGACATTCACCAAGCTTTTTAGTCGGCTTTTTGCCAAGAAAGAAATGCGAATTCTGATGGTTGGTCTTGATGCTGCTGGTAAGACTACTATTTTGTACAAGCTCAAGCTTGGTGAGATCGTGACTACAATCCCTACTATTGGGTTCAATGTGGAGACCGTGGAATACAAAAACATTAGCTTCACTGTTTGGGATGTTGGGGGCCAAGATAAGATTCGTCCTCTGTGGAGGCATTACTTCCAGAACACACAGGGTCTTATATTTGTTGTAGACAGCAATGACAGAGATAGGGTTGTTGAGGCCAGAGATGAGTTACATAGGATGTTGAATGAGGATGAATTGAGAGATGCGGTATTGCTTGTATTTGCCAACAAACAAGATCTTCCTAATGCAATGAATGCTGCTGAGATCACTGACAAGCTGGGGCTCCACTCTCTCAGGCAGCGTCACTGGTACATCCAGAGCACCTGTGCTACCTCTGGGGAAGGCCTTTATGAGGGTCTGGACTGGCTCTCTAACAACATTGCCAACAAGGCTTAA 600 0.4517 MQISLKLFLQRDPKAEGEMGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1072 199 Pfam ADP-ribosylation factor family 23 195 IPR006689 GO:0003924|GO:0005525
Alju09g1072 199 CDD Arf1_5_like 36 194 IPR045872 GO:0003924
Alju09g1072 199 ProSiteProfiles small GTPase Arf family profile. 29 195 - -
Alju09g1072 199 SMART arf_sub_2 19 199 - -
Alju09g1072 199 SMART sar_sub_1 19 195 IPR006689 GO:0003924|GO:0005525
Alju09g1072 199 NCBIfam small GTP-binding protein domain 34 175 IPR005225 GO:0005525
Alju09g1072 199 PRINTS GTP-binding SAR1 protein signature 65 89 IPR006689 GO:0003924|GO:0005525
Alju09g1072 199 PRINTS GTP-binding SAR1 protein signature 137 158 IPR006689 GO:0003924|GO:0005525
Alju09g1072 199 PRINTS GTP-binding SAR1 protein signature 92 117 IPR006689 GO:0003924|GO:0005525
Alju09g1072 199 PRINTS GTP-binding SAR1 protein signature 37 60 IPR006689 GO:0003924|GO:0005525
Alju09g1072 199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 197 IPR027417 -
Alju09g1072 199 PANTHER ADP RIBOSYLATION FACTOR-RELATED 19 194 IPR024156 GO:0005525
Alju09g1072 199 Gene3D - 22 199 IPR027417 -
Alju09g1072 199 SMART rab_sub_5 36 198 - -
Alju09g1072 199 FunFam ADP-ribosylation factor 1 19 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1072 Alju-ChrAlju09 33210717 33216650 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1072 09 33210717 33216650 Alju09g1072 09 33210717 33216650 ECH